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Pseudoknots

Insights into Ligand Binding to PreQ₁ Riboswitch Aptamer from Molecular Dynamics Simulations

Zhou Gong, Yunjie Zhao, Changjun Chen, Yong Duan, Yi Xiao

published 24 Mar 2014

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Secondary Structures of rRNAs from All Three Domains of Life

Anton S. Petrov, Chad R. Bernier, Burak Gulen, Chris C. Waterbury, Eli Hershkovits, Chiaolong Hsiao, Stephen C. Harvey, Nicholas V. Hud, George E. Fox, Roger M. Wartell, Loren Dean Williams

published 05 Feb 2014

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Viral IRES Prediction System - a Web Server for Prediction of the IRES Secondary Structure In Silico

Jun-Jie Hong, Tzong-Yuan Wu, Tsair-Yuan Chang, Chung-Yung Chen

published 05 Nov 2013

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Rab-GDI Complex Dissociation Factor Expressed through Translational Frameshifting in Filamentous Ascomycetes

Fabienne Malagnac, Céline Fabret, Magali Prigent, Jean-Pierre Rousset, Olivier Namy, Philippe Silar

published 19 Sep 2013

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Regulation of Programmed Ribosomal Frameshifting by Co-Translational Refolding RNA Hairpins

Che-Pei Cho, Szu-Chieh Lin, Ming-Yuan Chou, Hsiu-Ting Hsu, Kung-Yao Chang

published 29 Apr 2013

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Identification of Telomerase RNAs from Filamentous Fungi Reveals Conservation with Vertebrates and Yeasts

Paulius V. Kuprys, Shaun M. Davis, Tyler M. Hauer, Max Meltser, Yehuda Tzfati, Karen E. Kirk

published 14 Mar 2013

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Computational Study of Unfolding and Regulation Mechanism of preQ₁ Riboswitches

Zhou Gong, Yunjie Zhao, Changjun Chen, Yi Xiao

published 17 Sep 2012

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Conformational Features of Topologically Classified RNA Secondary Structures

Jimmy Ka Ho Chiu, Yi-Ping Phoebe Chen

published 05 Jul 2012

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The 3′ Splice Site of Influenza A Segment 7 mRNA Can Exist in Two Conformations: A Pseudoknot and a Hairpin

Walter N. Moss, Lumbini I. Dela-Moss, Elzbieta Kierzek, Ryszard Kierzek, Salvatore F. Priore, Douglas H. Turner

published 07 Jun 2012

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Annexin A2 Binds RNA and Reduces the Frameshifting Efficiency of Infectious Bronchitis Virus

Hoyun Kwak, Min Woo Park, Sunjoo Jeong

published 30 Aug 2011

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Computing the Partition Function for Kinetically Trapped RNA Secondary Structures

William A. Lorenz, Peter Clote

published 28 Jan 2011

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Prediction of RNA Pseudoknots Using Heuristic Modeling with Mapping and Sequential Folding

Wayne K. Dawson, Kazuya Fujiwara, Gota Kawai

published 19 Sep 2007

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