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Protein structure determination

In silico analysis of the V66M variant of human BDNF in psychiatric disorders: An approach to precision medicine

Clara Carolina Silva De Oliveira, Gabriel Rodrigues Coutinho Pereira, Jamile Yvis Santos De Alcantara, Deborah Antunes, Ernesto Raul Caffarena, Joelma Freire De Mesquita

published 18 Apr 2019

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Structural characterization of PPTI, a kunitz-type protein from the venom of Pseudocerastes persicus

Seyede Elnaz Banijamali, Mehriar Amininasab, Davood Zaeifi

published 11 Apr 2019

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Crystal structure of a Thermus aquaticus diversity-generating retroelement variable protein

Sumit Handa, Kharissa L. Shaw, Partho Ghosh

published 10 Jan 2019

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DeepCDpred: Inter-residue distance and contact prediction for improved prediction of protein structure

Shuangxi Ji, Tuğçe Oruç, Liam Mead, Muhammad Fayyaz Rehman, Christopher Morton Thomas, Sam Butterworth, Peter James Winn

published 08 Jan 2019

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De novo protein structure prediction using ultra-fast molecular dynamics simulation

Ngaam J. Cheung, Wookyung Yu

published 20 Nov 2018

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CARD domain of rat RIP2 kinase: Refolding, solution structure, pH-dependent behavior and protein-protein interactions

Sergey A. Goncharuk, Lilya E. Artemieva, Valentin M. Tabakmakher, Alexander S. Arseniev, Konstantin S. Mineev

published 23 Oct 2018

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In Silico evaluation and identification of fungi capable of producing endo-inulinase enzyme

Jayaram Chikkerur, Ashis Kumar Samanta, Arindam Dhali, Atul Purushottam Kolte, Sohini Roy, Pratheepa Maria

published 12 Jul 2018

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SAFlex: A structural alphabet extension to integrate protein structural flexibility and missing data information

Ikram Allam, Delphine Flatters, Géraldine Caumes, Leslie Regad, Vincent Delos, Gregory Nuel, Anne-Claude Camproux

published 05 Jul 2018

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Structural and functional analysis of Utp24, an endonuclease for processing 18S ribosomal RNA

Weidong An, Yifei Du, Keqiong Ye

published 11 Apr 2018

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Improving succinylation prediction accuracy by incorporating the secondary structure via helix, strand and coil, and evolutionary information from profile bigrams

Abdollah Dehzangi, Yosvany López, Sunil Pranit Lal, Ghazaleh Taherzadeh, Abdul Sattar, Tatsuhiko Tsunoda, Alok Sharma

published 12 Feb 2018

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The first dipeptidyl peptidase III from a thermophile: Structural basis for thermal stability and reduced activity

Igor Sabljić, Marko Tomin, Mihaela Matovina, Iva Sučec, Ana Tomašić Paić, Antonija Tomić, Marija Abramić, Sanja Tomić

published 08 Feb 2018

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Compatible topologies and parameters for NMR structure determination of carbohydrates by simulated annealing

Yingang Feng

published 12 Dec 2017

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Effects of forcefield and sampling method in all-atom simulations of inherently disordered proteins: Application to conformational preferences of human amylin

Enxi Peng, Nevena Todorova, Irene Yarovsky

published 12 Oct 2017

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