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Protein structure databases

Identification of a peptide inhibitor for the histone methyltransferase WHSC1

Michael J. Morrison, P. Ann Boriack-Sjodin, Kerren K. Swinger, Tim J. Wigle, Dipti Sadalge, Kevin W. Kuntz, Margaret Porter Scott, William P. Janzen, Richard Chesworth, Kenneth W. Duncan, Darren M. Harvey, John W. Lampe, Lorna H. Mitchell, Robert A. Copeland

published 09 May 2018

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ProtDataTherm: A database for thermostability analysis and engineering of proteins

Hassan Pezeshgi Modarres, Mohammad R. Mofrad, Amir Sanati-Nezhad

published 29 Jan 2018

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Large-scale mapping of bioactive peptides in structural and sequence space

Agustina E. Nardo, M. Cristina Añón, Gustavo Parisi

published 19 Jan 2018

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Crystal structure of human NLRP12 PYD domain and implication in homotypic interaction

Tengchuan Jin, Mo Huang, Jiansheng Jiang, Patrick Smith, Tsan Sam Xiao

published 02 Jan 2018

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Knowledge-based prediction of protein backbone conformation using a structural alphabet

Iyanar Vetrivel, Swapnil Mahajan, Manoj Tyagi, Lionel Hoffmann, Yves-Henri Sanejouand, Narayanaswamy Srinivasan, Alexandre G. de Brevern, Frédéric Cadet, Bernard Offmann

published 21 Nov 2017

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Docking analysis and the possibility of prediction efficacy for an anti-IL-13 biopharmaceutical treatment with tralokinumab and lebrikizumab for bronchial asthma

Yutaka Nakamura, Aki Sugano, Mika Ohta, Yutaka Takaoka

published 20 Nov 2017

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Mass spectrometry-based quantification of the cellular response to ultraviolet radiation in HeLa cells

Hong Xu, Xuanyi Chen, Nanjiao Ying, Meixia Wang, Xiaoli Xu, Rongyi Shi, Yuejin Hua

published 20 Nov 2017

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Protein dynamics and structural waters in bromodomains

Xiaoxiao Zhang, Kai Chen, Yun-Dong Wu, Olaf Wiest

published 27 Oct 2017

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Docking-based modeling of protein-protein interfaces for extensive structural and functional characterization of missense mutations

Didier Barradas-Bautista, Juan Fernández-Recio

published 25 Aug 2017

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Exploring the potential of a structural alphabet-based tool for mining multiple target conformations and target flexibility insight

Leslie Regad, Jean-Baptiste Chéron, Dhoha Triki, Caroline Senac, Delphine Flatters, Anne-Claude Camproux

published 17 Aug 2017

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THPdb: Database of FDA-approved peptide and protein therapeutics

Salman Sadullah Usmani, Gursimran Bedi, Jesse S. Samuel, Sandeep Singh, Sourav Kalra, Pawan Kumar, Anjuman Arora Ahuja, Meenu Sharma, Ankur Gautam, Gajendra P. S. Raghava

published 31 Jul 2017

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Solution NMR structure of the TRIM21 B-box2 and identification of residues involved in its interaction with the RING domain

Amélie Wallenhammar, Madhanagopal Anandapadamanaban, Alexander Lemak, Claudio Mirabello, Patrik Lundström, Björn Wallner, Maria Sunnerhagen

published 28 Jul 2017

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Accurate prediction of functional effects for variants by combining gradient tree boosting with optimal neighborhood properties

Yuliang Pan, Diwei Liu, Lei Deng

published 14 Jun 2017

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