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Protein structure databases

Dynamics based clustering of globin family members

Dror Tobi

published 04 Dec 2018

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Characterizing the relation of functional and Early Folding Residues in protein structures using the example of aminoacyl-tRNA synthetases

Sebastian Bittrich, Michael Schroeder, Dirk Labudde

published 30 Oct 2018

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Multi-criteria protein structure comparison and structural similarities analysis using pyMCPSC

Anuj Sharma, Elias S. Manolakos

published 17 Oct 2018

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SAFlex: A structural alphabet extension to integrate protein structural flexibility and missing data information

Ikram Allam, Delphine Flatters, Géraldine Caumes, Leslie Regad, Vincent Delos, Gregory Nuel, Anne-Claude Camproux

published 05 Jul 2018

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Pathway based therapeutic targets identification and development of an interactive database CampyNIBase of Campylobacter jejuni RM1221 through non-redundant protein dataset

Mohammad Uzzal Hossain, Taimur Md. Omar, Iftekhar Alam, Keshob Chandra Das, A. K. M. Mohiuddin, Chaman Ara Keya, Md. Salimullah

published 08 Jun 2018

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Investigation of protein quaternary structure via stoichiometry and symmetry ınformation

Selcuk Korkmaz, Jose M. Duarte, Andreas Prlić, Dincer Goksuluk, Gokmen Zararsiz, Osman Saracbasi, Stephen K. Burley, Peter W. Rose

published 04 Jun 2018

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Discovery and characterization of a thermostable two-domain GH6 endoglucanase from a compost metagenome

Marianne S. Jensen, Lasse Fredriksen, Alasdair K. MacKenzie, Phillip B. Pope, Ingar Leiros, Piotr Chylenski, Adele K. Williamson, Tony Christopeit, Heidi Østby, Gustav Vaaje-Kolstad, Vincent G. H. Eijsink

published 24 May 2018

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Insights into molecular mechanisms of drug metabolism dysfunction of human CYP2C9*30

Maxime Louet, Céline M. Labbé, Charline Fagnen, Cassiano M. Aono, Paula Homem-de-Mello, Bruno O. Villoutreix, Maria A. Miteva

published 10 May 2018

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Identification of a peptide inhibitor for the histone methyltransferase WHSC1

Michael J. Morrison, P. Ann Boriack-Sjodin, Kerren K. Swinger, Tim J. Wigle, Dipti Sadalge, Kevin W. Kuntz, Margaret Porter Scott, William P. Janzen, Richard Chesworth, Kenneth W. Duncan, Darren M. Harvey, John W. Lampe, Lorna H. Mitchell, Robert A. Copeland

published 09 May 2018

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ProtDataTherm: A database for thermostability analysis and engineering of proteins

Hassan Pezeshgi Modarres, Mohammad R. Mofrad, Amir Sanati-Nezhad

published 29 Jan 2018

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Large-scale mapping of bioactive peptides in structural and sequence space

Agustina E. Nardo, M. Cristina Añón, Gustavo Parisi

published 19 Jan 2018

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Crystal structure of human NLRP12 PYD domain and implication in homotypic interaction

Tengchuan Jin, Mo Huang, Jiansheng Jiang, Patrick Smith, Tsan Sam Xiao

published 02 Jan 2018

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Knowledge-based prediction of protein backbone conformation using a structural alphabet

Iyanar Vetrivel, Swapnil Mahajan, Manoj Tyagi, Lionel Hoffmann, Yves-Henri Sanejouand, Narayanaswamy Srinivasan, Alexandre G. de Brevern, Frédéric Cadet, Bernard Offmann

published 21 Nov 2017

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