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Protein structure databases

Upgraded molecular models of the human KCNQ1 potassium channel

Georg Kuenze, Amanda M. Duran, Hope Woods, Kathryn R. Brewer, Eli Fritz McDonald, Carlos G. Vanoye, Alfred L. George Jr., Charles R. Sanders, Jens Meiler

published 13 Sep 2019

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The number of domains in the ribosomal protein S1 as a hallmark of the phylogenetic grouping of bacteria

Andrey V. Machulin, Evgenia I. Deryusheva, Olga M. Selivanova, Oxana V. Galzitskaya

published 22 Aug 2019

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Identification of lead molecules against potential drug target protein MAPK4 from L. donovani: An in-silico approach using docking, molecular dynamics and binding free energy calculation

Shweta Raj, Santanu Sasidharan, Vikash Kumar Dubey, Prakash Saudagar

published 19 Aug 2019

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Unraveling the structural landscape of intra-chain domain interfaces: Implication in the evolution of domain-domain interactions

Rivi Verma, Shashi Bhushan Pandit

published 02 Aug 2019

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Understanding the impacts of missense mutations on structures and functions of human cancer-related genes: A preliminary computational analysis of the COSMIC Cancer Gene Census

Sony Malhotra, Ali F. Alsulami, Yang Heiyun, Bernardo Montano Ochoa, Harry Jubb, Simon Forbes, Tom L. Blundell

published 19 Jul 2019

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Prediction of disease-associated mutations in the transmembrane regions of proteins with known 3D structure

Petr Popov, Ilya Bizin, Michael Gromiha, Kulandaisamy A, Dmitrij Frishman

published 10 Jul 2019

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In silico analysis of PFN1 related to amyotrophic lateral sclerosis

Gabriel Rodrigues Coutinho Pereira, Giovanni Henrique Almeida Silva Tellini, Joelma Freire De Mesquita

published 19 Jun 2019

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Structural analysis of Cytochrome P450 BM3 mutant M11 in complex with dithiothreitol

Karla Frydenvang, Marlies C. A. Verkade-Vreeker, Floor Dohmen, Jan N. M. Commandeur, Maria Rafiq, Osman Mirza, Flemming Steen Jørgensen, Daan P. Geerke

published 24 May 2019

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Structural comparison strengthens the higher-order classification of proteases related to chymotrypsin

Heli A. M. Mönttinen, Janne J. Ravantti, Minna M. Poranen

published 17 May 2019

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RUPEE: A fast and accurate purely geometric protein structure search

Ronald Ayoub, Yugyung Lee

published 15 Mar 2019

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Repository of Enriched Structures of Proteins Involved in the Red Blood Cell Environment (RESPIRE)

S. Téletchéa, H. Santuz, S. Léonard, C. Etchebest

published 22 Feb 2019

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HuVarBase: A human variant database with comprehensive information at gene and protein levels

Kaliappan Ganesan, A. Kulandaisamy, S. Binny Priya, M. Michael Gromiha

published 31 Jan 2019

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Characteristics of interactions at protein segments without non-local intramolecular contacts in the Protein Data Bank

Kota Kasahara, Shintaro Minami, Yasunori Aizawa

published 11 Dec 2018

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