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Protein structure databases

FragKB: Structural and Literature Annotation Resource of Conserved Peptide Fragments and Residues

Ashish V. Tendulkar, Martin Krallinger, Victor de la Torre, Gonzalo López, Pramod P. Wangikar, Alfonso Valencia

published 18 Mar 2010

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Atomic Analysis of Protein-Protein Interfaces with Known Inhibitors: The 2P2I Database

Raphaël Bourgeas, Marie-Jeanne Basse, Xavier Morelli, Philippe Roche

published 09 Mar 2010

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Atomic Interaction Networks in the Core of Protein Domains and Their Native Folds

Venkataramanan Soundararajan, Rahul Raman, S. Raguram, V. Sasisekharan, Ram Sasisekharan

published 23 Feb 2010

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Comprehensive Identification and Modified-Site Mapping of S-Nitrosylated Targets in Prostate Epithelial Cells

Ying Wai Lam, Yong Yuan, Jared Isaac, C. V. Suresh Babu, Jarek Meller, Shuk-Mei Ho

published 05 Feb 2010

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Structural and Functional Roles of Coevolved Sites in Proteins

Saikat Chakrabarti, Anna R. Panchenko

published 06 Jan 2010

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SGC - Structural Biology and Human Health: A New Approach to Publishing Structural Biology Results

Wen Hwa Lee, Julián Atienza-Herrero, Ruben Abagyan, Brian D. Marsden

published 20 Oct 2009

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Structural and Functional Similarity between the Bacterial Type III Secretion System Needle Protein PrgI and the Eukaryotic Apoptosis Bcl-2 Proteins

Matthew D. Shortridge, Robert Powers

published 13 Oct 2009

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Physical Properties of Intact Proteins May Predict Allergenicity or Lack Thereof

Suchita Singh, Bhupesh Taneja, Sundeep Santosh Salvi, Anurag Agrawal

published 17 Jul 2009

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A Novel Human Tectonin Protein with Multivalent β-Propeller Folds Interacts with Ficolin and Binds Bacterial LPS

Diana Hooi Ping Low, Zhiwei Ang, Quan Yuan, Vladimir Frecer, Bow Ho, Jianzhu Chen, Jeak Ling Ding

published 16 Jul 2009

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PSPP: A Protein Structure Prediction Pipeline for Computing Clusters

Michael S. Lee, Rajkumar Bondugula, Valmik Desai, Nela Zavaljevski, In-Chul Yeh, Anders Wallqvist, Jaques Reifman

published 16 Jul 2009

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A Sequence and Structure Based Method to Predict Putative Substrates, Functions and Regulatory Networks of Endo Proteases

Prasanna Venkatraman, Satish Balakrishnan, Shashidhar Rao, Yogesh Hooda, Suyog Pol

published 27 May 2009

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An Estimate of the Numbers and Density of Low-Energy Structures (or Decoys) in the Conformational Landscape of Proteins

Kanagasabai Vadivel, Gautham Namasivayam

published 09 Apr 2009

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A Database of Domain Definitions for Proteins with Complex Interdomain Geometry

Indraneel Majumdar, Lisa N. Kinch, Nick V. Grishin

published 08 Apr 2009

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