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Protein structure databases

Computational and Statistical Analyses of Amino Acid Usage and Physico-Chemical Properties of the Twelve Late Embryogenesis Abundant Protein Classes

Emmanuel Jaspard, David Macherel, Gilles Hunault

published 16 May 2012

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Exploring Protein Dynamics Space: The Dynasome as the Missing Link between Protein Structure and Function

Ulf Hensen, Tim Meyer, Jürgen Haas, René Rex, Gert Vriend, Helmut Grubmüller

published 11 May 2012

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Retinoid-Binding Proteins: Similar Protein Architectures Bind Similar Ligands via Completely Different Ways

Yu-Ru Zhang, Yu-Qi Zhao, Jing-Fei Huang

published 04 May 2012

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Computational Modeling-Based Discovery of Novel Classes of Anti-Inflammatory Drugs That Target Lanthionine Synthetase C-Like Protein 2

Pinyi Lu, Raquel Hontecillas, William T. Horne, Adria Carbo, Monica Viladomiu, Mireia Pedragosa, David R. Bevan, Stephanie N. Lewis, Josep Bassaganya-Riera

published 11 Apr 2012

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Identification of Critical Amino Acids in an Immunodominant IgE Epitope of Pen c 13, a Major Allergen from Penicillium citrinum

Jui-Chieh Chen, Li-Li Chiu, Kuang-Lun Lee, Wei-Ning Huang, Jiing-Guang Chuang, Hsin-Kai Liao, Lu-Ping Chow

published 10 Apr 2012

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Chemoinformatic Identification of Novel Inhibitors against Mycobacterium tuberculosis L-aspartate α-decarboxylase

Reetu Sharma, Roopa Kothapalli, Antonius M. J. Van Dongen, Kunchithapadam Swaminathan

published 28 Mar 2012

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Text Mining Improves Prediction of Protein Functional Sites

Karin M. Verspoor, Judith D. Cohn, Komandur E. Ravikumar, Michael E. Wall

published 29 Feb 2012

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Core Site-Moiety Maps Reveal Inhibitors and Binding Mechanisms of Orthologous Proteins by Screening Compound Libraries

Kai-Cheng Hsu, Wen-Chi Cheng, Yen-Fu Chen, Hung-Jung Wang, Ling-Ting Li, Wen-Ching Wang, Jinn-Moon Yang

published 29 Feb 2012

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Protein-Protein Interactions in Clathrin Vesicular Assembly: Radial Distribution of Evolutionary Constraints in Interfaces

Rupali A. Gadkari, Narayanaswamy Srinivasan

published 22 Feb 2012

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Predicting Target DNA Sequences of DNA-Binding Proteins Based on Unbound Structures

Chien-Yu Chen, Ting-Ying Chien, Chih-Kang Lin, Chih-Wei Lin, Yi-Zhong Weng, Darby Tien-Hao Chang

published 01 Feb 2012

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Ashwagandha Derived Withanone Targets TPX2-Aurora A Complex: Computational and Experimental Evidence to its Anticancer Activity

Abhinav Grover, Rumani Singh, Ashutosh Shandilya, Didik Priyandoko, Vibhuti Agrawal, Virendra S. Bisaria, Renu Wadhwa, Sunil C. Kaul, Durai Sundar

published 27 Jan 2012

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Insights into the Mutation-Induced HHH Syndrome from Modeling Human Mitochondrial Ornithine Transporter-1

Jing-Fang Wang, Kuo-Chen Chou

published 26 Jan 2012

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Structural Constraints on the Covariance Matrix Derived from Multiple Aligned Protein Sequences

William R. Taylor, Michael I. Sadowski

published 05 Dec 2011

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