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Protein structure databases

A Method for WD40 Repeat Detection and Secondary Structure Prediction

Yang Wang, Fan Jiang, Zhu Zhuo, Xian-Hui Wu, Yun-Dong Wu

published 11 Jun 2013

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Functional Diversity and Structural Disorder in the Human Ubiquitination Pathway

Pallab Bhowmick, Rita Pancsa, Mainak Guharoy, Peter Tompa

published 29 May 2013

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Database Citation in Full Text Biomedical Articles

Şenay Kafkas, Jee-Hyub Kim, Johanna R. McEntyre

published 29 May 2013

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Serverification of Molecular Modeling Applications: The Rosetta Online Server That Includes Everyone (ROSIE)

Sergey Lyskov, Fang-Chieh Chou, Shane Ó. Conchúir, Bryan S. Der, Kevin Drew, Daisuke Kuroda, Jianqing Xu, Brian D. Weitzner, P. Douglas Renfrew, Parin Sripakdeevong, Benjamin Borgo, James J. Havranek, Brian Kuhlman, Tanja Kortemme, Richard Bonneau, Jeffrey J. Gray, Rhiju Das

published 22 May 2013

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Rapid Catalytic Template Searching as an Enzyme Function Prediction Procedure

Jerome P. Nilmeier, Daniel A. Kirshner, Sergio E. Wong, Felice C. Lightstone

published 10 May 2013

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DomHR: Accurately Identifying Domain Boundaries in Proteins Using a Hinge Region Strategy

Xiao-yan Zhang, Long-jian Lu, Qi Song, Qian-qian Yang, Da-peng Li, Jiang-ming Sun, Tong-hua Li, Pei-sheng Cong

published 11 Apr 2013

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An Innovative Strategy for Dual Inhibitor Design and Its Application in Dual Inhibition of Human Thymidylate Synthase and Dihydrofolate Reductase Enzymes

Mahreen Arooj, Sugunadevi Sakkiah, Guang ping Cao, Keun Woo Lee

published 05 Apr 2013

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Predicting where Small Molecules Bind at Protein-Protein Interfaces

Peter Walter, Jennifer Metzger, Christoph Thiel, Volkhard Helms

published 07 Mar 2013

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Hydrogen Bond Strengths in Phosphorylated and Sulfated Amino Acid Residues

Chaya Rapp, Hadassa Klerman, Emily Levine, Christopher L. McClendon

published 05 Mar 2013

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Alignment of Helical Membrane Protein Sequences Using AlignMe

Marcus Stamm, René Staritzbichler, Kamil Khafizov, Lucy R. Forrest

published 04 Mar 2013

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Towards Improved Quality of GPCR Models by Usage of Multiple Templates and Profile-Profile Comparison

Dorota Latek, Pawel Pasznik, Teresa Carlomagno, Slawomir Filipek

published 28 Feb 2013

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Hierarchical Classification of Protein Folds Using a Novel Ensemble Classifier

Chen Lin, Ying Zou, Ji Qin, Xiangrong Liu, Yi Jiang, Caihuan Ke, Quan Zou

published 20 Feb 2013

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Improved Detection of Remote Homologues Using Cascade PSI-BLAST: Influence of Neighbouring Protein Families on Sequence Coverage

Swati Kaushik, Eshita Mutt, Ajithavalli Chellappan, Sandhya Sankaran, Narayanaswamy Srinivasan, Ramanathan Sowdhamini

published 20 Feb 2013

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