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Protein structure databases

Drug Promiscuity in PDB: Protein Binding Site Similarity Is Key

V. Joachim Haupt, Simone Daminelli, Michael Schroeder

published 21 Jun 2013

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Proteolytic Characteristics of Cathepsin D Related to the Recognition and Cleavage of Its Target Proteins

Huiying Sun, Xiaomin Lou, Qiang Shan, Ju Zhang, Xu Zhu, Jia Zhang, Yang Wang, Yingying Xie, Ningzhi Xu, Siqi Liu

published 20 Jun 2013

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Insights into an Original Pocket-Ligand Pair Classification: A Promising Tool for Ligand Profile Prediction

Stéphanie Pérot, Leslie Regad, Christelle Reynès, Olivier Spérandio, Maria A. Miteva, Bruno O. Villoutreix, Anne-Claude Camproux

published 20 Jun 2013

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LAMP: A Database Linking Antimicrobial Peptides

Xiaowei Zhao, Hongyu Wu, Hairong Lu, Guodong Li, Qingshan Huang

published 18 Jun 2013

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Structural Modeling and In Silico Analysis of Human Superoxide Dismutase 2

Mariana Dias Castela de Carvalho, Joelma Freire De Mesquita

published 13 Jun 2013

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A Method for WD40 Repeat Detection and Secondary Structure Prediction

Yang Wang, Fan Jiang, Zhu Zhuo, Xian-Hui Wu, Yun-Dong Wu

published 11 Jun 2013

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Functional Diversity and Structural Disorder in the Human Ubiquitination Pathway

Pallab Bhowmick, Rita Pancsa, Mainak Guharoy, Peter Tompa

published 29 May 2013

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Database Citation in Full Text Biomedical Articles

Şenay Kafkas, Jee-Hyub Kim, Johanna R. McEntyre

published 29 May 2013

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Serverification of Molecular Modeling Applications: The Rosetta Online Server That Includes Everyone (ROSIE)

Sergey Lyskov, Fang-Chieh Chou, Shane Ó. Conchúir, Bryan S. Der, Kevin Drew, Daisuke Kuroda, Jianqing Xu, Brian D. Weitzner, P. Douglas Renfrew, Parin Sripakdeevong, Benjamin Borgo, James J. Havranek, Brian Kuhlman, Tanja Kortemme, Richard Bonneau, Jeffrey J. Gray, Rhiju Das

published 22 May 2013

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Rapid Catalytic Template Searching as an Enzyme Function Prediction Procedure

Jerome P. Nilmeier, Daniel A. Kirshner, Sergio E. Wong, Felice C. Lightstone

published 10 May 2013

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DomHR: Accurately Identifying Domain Boundaries in Proteins Using a Hinge Region Strategy

Xiao-yan Zhang, Long-jian Lu, Qi Song, Qian-qian Yang, Da-peng Li, Jiang-ming Sun, Tong-hua Li, Pei-sheng Cong

published 11 Apr 2013

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An Innovative Strategy for Dual Inhibitor Design and Its Application in Dual Inhibition of Human Thymidylate Synthase and Dihydrofolate Reductase Enzymes

Mahreen Arooj, Sugunadevi Sakkiah, Guang ping Cao, Keun Woo Lee

published 05 Apr 2013

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Predicting where Small Molecules Bind at Protein-Protein Interfaces

Peter Walter, Jennifer Metzger, Christoph Thiel, Volkhard Helms

published 07 Mar 2013

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