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Protein structure databases

New Binding Site Conformations of the Dengue Virus NS3 Protease Accessed by Molecular Dynamics Simulation

Hugo de Almeida, Izabela M. D. Bastos, [ ... ], Jaime M. Santana

Deciphering the Glycan Preference of Bacterial Lectins by Glycan Array and Molecular Docking with Validation by Microcalorimetry and Crystallography

Jeremie Topin, Julie Arnaud, [ ... ], Aline Thomas

Identification of Potential Plk1 Targets in a Cell-Cycle Specific Proteome through Structural Dynamics of Kinase and Polo Box-Mediated Interactions

Nousheen Bibi, Zahida Parveen, Sajid Rashid

Homology Modeling of the CheW Coupling Protein of the Chemotaxis Signaling Complex

Derek J. Cashman, Davi R. Ortega, Igor B. Zhulin, Jerome Baudry

A Computational Module Assembled from Different Protease Family Motifs Identifies PI PLC from Bacillus cereus as a Putative Prolyl Peptidase with a Serine Protease Scaffold

Adela Rendón-Ramírez, Manish Shukla, [ ... ], Basuthkar J. Rao

Transmembrane Protein Alignment and Fold Recognition Based on Predicted Topology

Han Wang, Zhiquan He, [ ... ], Dong Xu

Effects of NMR Spectral Resolution on Protein Structure Calculation

Suhas Tikole, Victor Jaravine, Vladislav Yu. Orekhov, Peter Güntert

The PyRosetta Toolkit: A Graphical User Interface for the Rosetta Software Suite

Jared Adolf-Bryfogle, Roland L. Dunbrack Jr.

Drug Promiscuity in PDB: Protein Binding Site Similarity Is Key

V. Joachim Haupt, Simone Daminelli, Michael Schroeder

Proteolytic Characteristics of Cathepsin D Related to the Recognition and Cleavage of Its Target Proteins

Huiying Sun, Xiaomin Lou, [ ... ], Siqi Liu

Insights into an Original Pocket-Ligand Pair Classification: A Promising Tool for Ligand Profile Prediction

Stéphanie Pérot, Leslie Regad, [ ... ], Anne-Claude Camproux

LAMP: A Database Linking Antimicrobial Peptides

Xiaowei Zhao, Hongyu Wu, [ ... ], Qingshan Huang

Structural Modeling and In Silico Analysis of Human Superoxide Dismutase 2

Mariana Dias Castela de Carvalho, Joelma Freire De Mesquita

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