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Protein structure databases

CleavPredict: A Platform for Reasoning about Matrix Metalloproteinases Proteolytic Events

Sonu Kumar, Boris I. Ratnikov, Marat D. Kazanov, Jeffrey W. Smith, Piotr Cieplak

published 21 May 2015

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Discovery of an Inhibitor of Z-Alpha1 Antitrypsin Polymerization

Valerie Berthelier, Jason Brett Harris, Kasey Noel Estenson, Jerome Baudry

published 11 May 2015

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Evidence for Positive Selection within the PgiC1 Locus in the Grass Festuca ovina

Yuan Li, Björn Canbäck, Tomas Johansson, Anders Tunlid, Honor C. Prentice

published 06 May 2015

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Building a Better Fragment Library for De Novo Protein Structure Prediction

Saulo H. P. de Oliveira, Jiye Shi, Charlotte M. Deane

published 22 Apr 2015

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Positively-Charged Semi-Tunnel Is a Structural and Surface Characteristic of Polyphosphate-Binding Proteins: An In-Silico Study

Zheng Zachory Wei, Greg Vatcher, Alvin Hok Yan Tin, Jun Lin Teng, Juan Wang, Qing Hua Cui, Jian Guo Chen, Albert Cheung Hoi Yu

published 16 Apr 2015

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Crystal Structure of a Two-Subunit TrkA Octameric Gating Ring Assembly

Marc C. Deller, Hope A. Johnson, Mitchell D. Miller, Glen Spraggon, Marc-André Elsliger, Ian A. Wilson, Scott A. Lesley

published 31 Mar 2015

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StaRProtein, A Web Server for Prediction of the Stability of Repeat Proteins

Yongtao Xu, Xu Zhou, Meilan Huang

published 25 Mar 2015

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VORFFIP-Driven Dock: V-D²OCK, a Fast and Accurate Protein Docking Strategy

Joan Segura, Manuel Alejandro Marín-López, Pamela F. Jones, Baldo Oliva, Narcis Fernandez-Fuentes

published 12 Mar 2015

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Structural and Functional Investigation of Flavin Binding Center of the NqrC Subunit of Sodium-Translocating NADH:Quinone Oxidoreductase from Vibrio harveyi

Valentin Borshchevskiy, Ekaterina Round, Yulia Bertsova, Vitaly Polovinkin, Ivan Gushchin, Andrii Ishchenko, Kirill Kovalev, Alexey Mishin, Galina Kachalova, Alexander Popov, Alexander Bogachev, Valentin Gordeliy

published 03 Mar 2015

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Histidine 352 (His³⁵²) and Tryptophan 355 (Trp³⁵⁵) Are Essential for Flax UGT74S1 Glucosylation Activity toward Secoisolariciresinol

Kaushik Ghose, Jason McCallum, Marva Sweeney-Nixon, Bourlaye Fofana

published 25 Feb 2015

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Classification of Beta-Lactamases and Penicillin Binding Proteins Using Ligand-Centric Network Models

Hakime Öztürk, Elif Ozkirimli, Arzucan Özgür

published 17 Feb 2015

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Structure Based Annotation of Helicobacter pylori Strain 26695 Proteome

Swati Singh, Praveen Kumar Guttula, Lalitha Guruprasad

published 30 Dec 2014

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Computational Analysis and Mapping of Novel Open Reading Frames in Influenza A Viruses

Yu-Nong Gong, Guang-Wu Chen, Chi-Jene Chen, Rei-Lin Kuo, Shin-Ru Shih

published 15 Dec 2014

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