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Protein structure databases

CPAD, Curated Protein Aggregation Database: A Repository of Manually Curated Experimental Data on Protein and Peptide Aggregation

A. Mary Thangakani, R. Nagarajan, Sandeep Kumar, R. Sakthivel, D. Velmurugan, M. Michael Gromiha

published 04 Apr 2016

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Crystallographic Study of Peptidoglycan Biosynthesis Enzyme MurD: Domain Movement Revisited

Roman Šink, Miha Kotnik, Anamarija Zega, Hélène Barreteau, Stanislav Gobec, Didier Blanot, Andréa Dessen, Carlos Contreras-Martel

published 31 Mar 2016

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On Nature’s Strategy for Assigning Genetic Code Multiplicity

Simone Gardini, Sara Cheli, Silvia Baroni, Gabriele Di Lascio, Guido Mangiavacchi, Nicholas Micheletti, Carmen Luigia Monaco, Lorenzo Savini, Davide Alocci, Stefano Mangani, Neri Niccolai

published 05 Feb 2016

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The Chlamydia trachomatis Protease CPAF Contains a Cryptic PDZ-Like Domain with Similarity to Human Cell Polarity and Tight Junction PDZ-Containing Proteins

Kenneth R. Maksimchuk, Katherine A. Alser, Rui Mou, Raphael H. Valdivia, Dewey G. McCafferty

published 01 Feb 2016

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Uncovering New Pathogen–Host Protein–Protein Interactions by Pairwise Structure Similarity

Tao Cui, Weihui Li, Lei Liu, Qiaoyun Huang, Zheng-Guo He

published 22 Jan 2016

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BAD, a Proapoptotic Protein, Escapes ERK/RSK Phosphorylation in Deguelin and siRNA-Treated HeLa Cells

Samra Hafeez, Mahwish Urooj, Shamiala Saleem, Zeeshan Gillani, Sumaira Shaheen, Mahmood Husain Qazi, Muhammad Imran Naseer, Zafar Iqbal, Shakeel Ahmed Ansari, Absarul Haque, Muhammad Asif, Manzoor Ahmad Mir, Ashraf Ali, Peter Natesan Pushparaj, Mohammad Sarwar Jamal, Mahmood Rasool

published 08 Jan 2016

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Comparing Residue Clusters from Thermophilic and Mesophilic Enzymes Reveals Adaptive Mechanisms

Deanne W. Sammond, Noah Kastelowitz, Michael E. Himmel, Hang Yin, Michael F. Crowley, Yannick J. Bomble

published 07 Jan 2016

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Molecular Dynamics Assisted Mechanistic Study of Isoniazid-Resistance against Mycobacterium tuberculosis InhA

Vivek Kumar, M. Elizabeth Sobhia

published 14 Dec 2015

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Release of 50 new, drug-like compounds and their computational target predictions for open source anti-tubercular drug discovery

María Jose Rebollo-Lopez, Joël Lelièvre, Daniel Alvarez-Gomez, Julia Castro-Pichel, Francisco Martínez-Jiménez, George Papadatos, Vinod Kumar, Gonzalo Colmenarejo, Grace Mugumbate, Mark Hurle, Vanessa Barroso, Rob J. Young, María Martinez-Hoyos, Rubén González del Río, Robert H. Bates, Eva Maria Lopez-Roman, Alfonso Mendoza-Losana, James R. Brown, Emilio Alvarez-Ruiz, Marc A. Marti-Renom, John P. Overington, Nicholas Cammack, Lluís Ballell, David Barros-Aguire

published 07 Dec 2015

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Continuous Distributed Representation of Biological Sequences for Deep Proteomics and Genomics

Ehsaneddin Asgari, Mohammad R. K. Mofrad

published 10 Nov 2015

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Mixed Inhibition of cPEPCK by Genistein, Using an Extended Binding Site Located Adjacent to Its Catalytic Cleft

Shashank Prakash Katiyar, Arpit Jain, Jaspreet Kaur Dhanjal, Durai Sundar

published 03 Nov 2015

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Computational Identification of MoRFs in Protein Sequences Using Hierarchical Application of Bayes Rule

Nawar Malhis, Eric T. C. Wong, Roy Nassar, Jörg Gsponer

published 30 Oct 2015

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DisPredict: A Predictor of Disordered Protein Using Optimized RBF Kernel

Sumaiya Iqbal, Md Tamjidul Hoque

published 30 Oct 2015

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