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Protein structure databases

Unveiling the Mechanism of Arginine Transport through AdiC with Molecular Dynamics Simulations: The Guiding Role of Aromatic Residues

Eva-Maria Krammer, Kassem Ghaddar, Bruno André, Martine Prévost

Genome-Wide Prediction and Analysis of 3D-Domain Swapped Proteins in the Human Genome from Sequence Information

Atul Kumar Upadhyay, Ramanathan Sowdhamini

Identification of a 3^rd Na⁺ Binding Site of the Glycine Transporter, GlyT2

Nandhitha Subramanian, Amanda J. Scopelitti, [ ... ], Robert J. Vandenberg

Examining the Conservation of Kinks in Alpha Helices

Eleanor C. Law, Henry R. Wilman, [ ... ], Charlotte M. Deane

Use of an Improved Matching Algorithm to Select Scaffolds for Enzyme Design Based on a Complex Active Site Model

Xiaoqiang Huang, Jing Xue, Min Lin, Yushan Zhu

Computational Framework for Prediction of Peptide Sequences That May Mediate Multiple Protein Interactions in Cancer-Associated Hub Proteins

Debasree Sarkar, Piya Patra, Abhirupa Ghosh, Sudipto Saha

G-Protein/β-Arrestin-Linked Fluctuating Network of G-Protein-Coupled Receptors for Predicting Drug Efficacy and Bias Using Short-Term Molecular Dynamics Simulation

Osamu Ichikawa, Kazushi Fujimoto, [ ... ], Kazuto Yamazaki

Vinardo: A Scoring Function Based on Autodock Vina Improves Scoring, Docking, and Virtual Screening

Rodrigo Quiroga, Marcos A. Villarreal

Addressing the Role of Conformational Diversity in Protein Structure Prediction

Nicolas Palopoli, Alexander Miguel Monzon, Gustavo Parisi, Maria Silvina Fornasari

Estimation of Uncertainties in the Global Distance Test (GDT_TS) for CASP Models

Wenlin Li, R. Dustin Schaeffer, Zbyszek Otwinowski, Nick V. Grishin

Rational Structure-Based Rescaffolding Approach to De Novo Design of Interleukin 10 (IL-10) Receptor-1 Mimetics

Gloria Ruiz-Gómez, John C. Hawkins, [ ... ], M. Teresa Pisabarro

Viral Evolved Inhibition Mechanism of the RNA Dependent Protein Kinase PKR's Kinase Domain, a Structural Perspective

K. Hari Krishna, Yallamandayya Vadlamudi, Muthuvel Suresh Kumar

Cupincin: A Unique Protease Purified from Rice (Oryza sativa L.) Bran Is a New Member of the Cupin Superfamily

Roopesh Sreedhar, Purnima Kaul Tiku

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