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Protein structure databases

Critical Features of Fragment Libraries for Protein Structure Prediction

Raphael Trevizani, Fábio Lima Custódio, Karina Baptista dos Santos, Laurent Emmanuel Dardenne

published 13 Jan 2017

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Using the Amino Acid Network to Modulate the Hydrolytic Activity of β-Glycosidases

Fábio K. Tamaki, Diorge P. Souza, Valquiria P. Souza, Cecilia M. Ikegami, Chuck S. Farah, Sandro R. Marana

published 09 Dec 2016

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The RAS-Effector Interface: Isoform-Specific Differences in the Effector Binding Regions

Hossein Nakhaeizadeh, Ehsan Amin, Saeideh Nakhaei-Rad, Radovan Dvorsky, Mohammad Reza Ahmadian

published 09 Dec 2016

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Single Amino Acid Repeats in the Proteome World: Structural, Functional, and Evolutionary Insights

Amitha Sampath Kumar, Divya Tej Sowpati, Rakesh K. Mishra

published 28 Nov 2016

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In Search of Functional Advantages of Knots in Proteins

Pawel Dabrowski-Tumanski, Andrzej Stasiak, Joanna I. Sulkowska

published 02 Nov 2016

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Hydrogen Bond Dynamic Propensity Studies for Protein Binding and Drug Design

Cintia A. Menéndez, Sebastián R. Accordino, Darío C. Gerbino, Gustavo A. Appignanesi

published 28 Oct 2016

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Structural Insights into the Methylation of C1402 in 16S rRNA by Methyltransferase RsmI

Mohan Zhao, Heng Zhang, Guangfeng Liu, Li Wang, Jian Wang, Zengqiang Gao, Yuhui Dong, Linbo Zhang, Yong Gong

published 06 Oct 2016

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Structural Basis of Mucopolysaccharidosis Type II and Construction of a Database of Mutant Iduronate 2-Sulfatases

Seiji Saito, Kazuki Ohno, Torayuki Okuyama, Hitoshi Sakuraba

published 03 Oct 2016

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Fusion Molecules of Heat Shock Protein HSPX with Other Antigens of Mycobacterium tuberculosis Show High Potential in Serodiagnosis of Tuberculosis

Ruqyya Khalid, Madeeha Afzal, Sana Khurshid, Rehan Zafar Paracha, Imran H. Khan, Muhammad Waheed Akhtar

published 21 Sep 2016

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DockQ: A Quality Measure for Protein-Protein Docking Models

Sankar Basu, Björn Wallner

published 25 Aug 2016

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A Systematic Analysis of the Structures of Heterologously Expressed Proteins and Those from Their Native Hosts in the RCSB PDB Archive

Ren-Bin Zhou, Hui-Meng Lu, Jie Liu, Jian-Yu Shi, Jing Zhu, Qin-Qin Lu, Da-Chuan Yin

published 12 Aug 2016

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Predicting Ligand Binding Sites on Protein Surfaces by 3-Dimensional Probability Density Distributions of Interacting Atoms

Jhih-Wei Jian, Pavadai Elumalai, Thejkiran Pitti, Chih Yuan Wu, Keng-Chang Tsai, Jeng-Yih Chang, Hung-Pin Peng, An-Suei Yang

published 11 Aug 2016

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The Ramachandran Number: An Order Parameter for Protein Geometry

Ranjan V. Mannige, Joyjit Kundu, Stephen Whitelam

published 04 Aug 2016

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