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Protein structure comparison

Assessing multiple score functions in Rosetta for drug discovery

Shannon T. Smith, Jens Meiler

published 12 Oct 2020

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Morphological peculiarities of the DNA-protein complexes in starved Escherichia coli cells

Natalia Loiko, Yana Danilova, Andrey Moiseenko, Vladislav Kovalenko, Ksenia Tereshkina, Maria Tutukina, Galina El-Registan, Olga Sokolova, Yurii Krupyanskii

published 02 Oct 2020

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Aquaporins are main contributors to root hydraulic conductivity in pearl millet [Pennisetum glaucum (L) R. Br.]

Alexandre Grondin, Pablo Affortit, Christine Tranchant-Dubreuil, Carla de la Fuente-Cantó, Cédric Mariac, Pascal Gantet, Vincent Vadez, Yves Vigouroux, Laurent Laplaze

published 01 Oct 2020

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Characterization of the C-terminal tail of the Arc protein

Melissa Boldridge, Jody Shimabukuro, Keith Nakamatsu, Christian Won, Chad Jansen, Helen Turner, Lei Wang

published 29 Sep 2020

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Data-driven network alignment

Shawn Gu, Tijana Milenković

published 02 Jul 2020

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NMR resonance assignment and structure prediction of the C-terminal domain of the microtubule end-binding protein 3

Hazem Abdelkarim, Ben Hitchinson, Xinyan Qu, Avik Banerjee, Yulia A. Komarova, Vadim Gaponenko

published 18 May 2020

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Multifaceted analysis of training and testing convolutional neural networks for protein secondary structure prediction

Maxim Shapovalov, Roland L. Dunbrack Jr., Slobodan Vucetic

published 06 May 2020

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Comprehensive analysis of Translationally Controlled Tumor Protein (TCTP) provides insights for lineage-specific evolution and functional divergence

Namjin Koo, Ah-Young Shin, Sangho Oh, Hyeongmin Kim, Seongmin Hong, Seong-Jin Park, Young Mi Sim, Iksu Byeon, Kye Young Kim, Yong Pyo Lim, Suk-Yoon Kwon, Yong-Min Kim

published 06 May 2020

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Expansion of the Transporter-Opsin-G protein-coupled receptor superfamily with five new protein families

Arturo Medrano-Soto, Faezeh Ghazi, Kevin J. Hendargo, Gabriel Moreno-Hagelsieb, Scott Myers, Milton H. Saier Jr

published 22 Apr 2020

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Sex-specific expression profiles of ecdysteroid biosynthesis and ecdysone response genes in extreme sexual dimorphism of the mealybug Planococcus kraunhiae (Kuwana)

Miyuki Muramatsu, Tomohiro Tsuji, Sayumi Tanaka, Takahiro Shiotsuki, Akiya Jouraku, Ken Miura, Isabelle Mifom Vea, Chieka Minakuchi

published 13 Apr 2020

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Difference contact maps: From what to why in the analysis of the conformational flexibility of proteins

Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Mayya Sedova, Adam Godzik

published 12 Mar 2020

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An insight into structural plasticity and conformational transitions of transcriptional co-activator Sus1

Akhilendra Pratap Bharati, Mohd Kashif, Sumit Kumar Chaturvedi, Rizwan Hasan Khan, Abrar Ahmad

published 05 Mar 2020

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SPECS: Integration of side-chain orientation and global distance-based measures for improved evaluation of protein structural models

Rahul Alapati, Md. Hossain Shuvo, Debswapna Bhattacharya

published 13 Feb 2020

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