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Protein structure comparison

The PCI domains are “winged” HEAT domains

Eleanor Elise Paul, Assen Marintchev

Structural insights into the RNA interaction with Yam bean Mosaic virus (coat protein) from Pachyrhizus erosus using bioinformatics approach

Varsha Acharya, R. Arutselvan, [ ... ], M. Nedunchezhiyan

AlphaFold2 and RoseTTAFold predict posttranslational modifications. Chromophore formation in GFP-like proteins

Sophia M. Hartley, Kelly A. Tiernan, [ ... ], Marc Zimmer

idpr: A package for profiling and analyzing Intrinsically Disordered Proteins in R

William M. McFadden, Judith L. Yanowitz

Quantitative analysis of visual codewords of a protein distance matrix

Jure Pražnikar, Nuwan Tharanga Attygalle

Computational and structural based approach to identify malignant nonsynonymous single nucleotide polymorphisms associated with CDK4 gene

Rahatul Islam, Mashiur Rahaman, [ ... ], Nurnabi Azad Jewel

Comprehensive mutagenesis to identify amino acid residues contributing to the difference in thermostability between two originally thermostable ancestral proteins

Satoshi Akanuma, Minako Yamaguchi, Akihiko Yamagishi

Predicting aptamer sequences that interact with target proteins using an aptamer-protein interaction classifier and a Monte Carlo tree search approach

Gwangho Lee, Gun Hyuk Jang, Ho Young Kang, Giltae Song

Selective transport of fluorescent proteins into the phage nucleus

Katrina T. Nguyen, Joseph Sugie, [ ... ], Joe Pogliano

Refining pairwise sequence alignments of membrane proteins by the incorporation of anchors

René Staritzbichler, Edoardo Sarti, [ ... ], Lucy R. Forrest

Naegleria fowleri: Protein structures to facilitate drug discovery for the deadly, pathogenic free-living amoeba

Logan Tillery, Kayleigh Barrett, [ ... ], Wesley C. Van Voorhis

Alignment of virus-host protein-protein interaction networks by integer linear programming: SARS-CoV-2

Mercè Llabrés, Gabriel Valiente

Computational analysis of the metal selectivity of matrix metalloproteinase 8

Zheng Long

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