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Protein structure comparison

The effect of the genomic GC content bias of prokaryotic organisms on the secondary structures of their proteins

Diana Barceló-Antemate, Fernando Fontove-Herrera, Walter Santos, Enrique Merino

published 04 May 2023

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B-cell epitope discovery: The first protein flexibility-based algorithm–Zika virus conserved epitope demonstration

Daniel W. Biner, Jason S. Grosch, Peter J. Ortoleva

published 15 Mar 2023

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A deep graph convolutional neural network architecture for graph classification

Yuchen Zhou, Hongtao Huo, Zhiwen Hou, Fanliang Bu

published 10 Mar 2023

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FHbp variants among meningococci of serogroup B in Italy: Evolution and selective pressure, 2014–2017

Alessandra Lo Presti, Anna Carannante, Cecilia Fazio, Arianna Neri, Paola Vacca, Luigina Ambrosio, Florigio Lista, Silvia Fillo, Paola Stefanelli

published 16 Feb 2023

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Twenty-seven ZAD-ZNF genes of Drosophila melanogaster are orthologous to the embryo polarity determining mosquito gene cucoid

Muzi Li, Koray Kasan, Zinnia Saha, Yoseop Yoon, Urs Schmidt-Ott

published 03 Jan 2023

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Candidate effector proteins from the oomycetes Plasmopara viticola and Phytophthora parasitica share similar predicted structures and induce cell death in Nicotiana species

Maud Combier, Edouard Evangelisti, Marie-Christine Piron, Sebastian Schornack, Pere Mestre

published 02 Dec 2022

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Molecular modelling of the HCMV IL-10 protein isoforms and analysis of their interaction with the human IL-10 receptor

Simone Queiroz Pantaleão, Lívia de Moraes Bomediano Camillo, Tainan Cerqueira Neves, Isabela de Godoy Menezes, Lucas Matheus Stangherlin, Helena Beatriz de Carvalho Ruthner Batista, Emma Poole, Michael Nevels, Eric Alisson Philot, Ana Ligia Scott, Maria Cristina Carlan da Silva

published 28 Nov 2022

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Emulation of the structure of the Saposin protein fold by a lung surfactant peptide construct of surfactant Protein B

Alan J. Waring, Julian P. Whitelegge, Shantanu K. Sharma, Larry M. Gordon, Frans J. Walther

published 03 Nov 2022

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Structure of Klebsiella pneumoniae adenosine monophosphate nucleosidase

Brian C. Richardson, Roger Shek, Wesley C. Van Voorhis, Jarrod B. French

published 20 Oct 2022

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In silico functional annotation of hypothetical proteins from the Bacillus paralicheniformis strain Bac84 reveals proteins with biotechnological potentials and adaptational functions to extreme environments

Md. Atikur Rahman, Uzma Habiba Heme, Md. Anowar Khasru Parvez

published 13 Oct 2022

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Natural selection drives the evolution of mitogenomes in Acrossocheilus

Dan Zhao, Yudong Guo, Yang Gao

published 13 Oct 2022

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A whole genome sequencing approach to anterior cruciate ligament rupture–a twin study in two unrelated families

Daneil Feldmann, Christian D. Bope, Jon Patricios, Emile R. Chimusa, Malcolm Collins, Alison V. September

published 06 Oct 2022

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Molecular insight into Aspergillus oryzae β-mannanase interacting with mannotriose revealed by molecular dynamic simulation study

Uttam Kumar Jana, Gagandeep Singh, Hemant Soni, Brett Pletschke, Naveen Kango

published 16 Sep 2022

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