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Protein structure comparison

Local Alignment Refinement Using Structural Assessment

Pierre Chodanowski, Aurélien Grosdidier, Ernest Feytmans, Olivier Michielin

published 09 Jul 2008

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High-Resolution 3D Structure Determination of Kaliotoxin by Solid-State NMR Spectroscopy

Jegannath Korukottu, Robert Schneider, Vinesh Vijayan, Adam Lange, Olaf Pongs, Stefan Becker, Marc Baldus, Markus Zweckstetter

published 04 Jun 2008

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SP⁵: Improving Protein Fold Recognition by Using Torsion Angle Profiles and Profile-Based Gap Penalty Model

Wei Zhang, Song Liu, Yaoqi Zhou

published 04 Jun 2008

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Stylus: A System for Evolutionary Experimentation Based on a Protein/Proteome Model with Non-Arbitrary Functional Constraints

Douglas D. Axe, Brendan W. Dixon, Philip Lu

published 04 Jun 2008

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The Nod-Like Receptor (NLR) Family: A Tale of Similarities and Differences

Martina Proell, Stefan J. Riedl, Jörg H. Fritz, Ana M. Rojas, Robert Schwarzenbacher

published 30 Apr 2008

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Nature of Protein Family Signatures: Insights from Singular Value Analysis of Position-Specific Scoring Matrices

Akira R. Kinjo, Haruki Nakamura

published 09 Apr 2008

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Alignment of Non-Covalent Interactions at Protein-Protein Interfaces

Hongbo Zhu, Ingolf Sommer, Thomas Lengauer, Francisco S. Domingues

published 02 Apr 2008

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Distinguishing Molecular Features and Clinical Characteristics of a Putative New Rhinovirus Species, Human Rhinovirus C (HRV C)

Peter McErlean, Laura A. Shackelton, Emily Andrews, Dale R. Webster, Stephen B. Lambert, Michael D. Nissen, Theo P. Sloots, Ian M. Mackay

published 02 Apr 2008

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Homology Modeling of Dissimilatory APS Reductases (AprBA) of Sulfur-Oxidizing and Sulfate-Reducing Prokaryotes

Birte Meyer, Jan Kuever

published 30 Jan 2008

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Conservation, Variability and the Modeling of Active Protein Kinases

James D. R. Knight, Bin Qian, David Baker, Rashmi Kothary

published 03 Oct 2007

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Early Evolution of Ionotropic GABA Receptors and Selective Regimes Acting on the Mammalian-Specific Theta and Epsilon Subunits

Christopher J. Martyniuk, Stéphane Aris-Brosou, Guy Drouin, Joel Cahn, Vance L. Trudeau

published 19 Sep 2007

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A Framework for Exploring Functional Variability in Olfactory Receptor Genes

Orna Man, David C. Willhite, Chiquito J. Crasto, Gordon M. Shepherd, Yoav Gilad

published 01 Aug 2007

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HIV-Specific Probabilistic Models of Protein Evolution

David C. Nickle, Laura Heath, Mark A. Jensen, Peter B. Gilbert, James I. Mullins, Sergei L. Kosakovsky Pond

published 06 Jun 2007

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