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Protein structure comparison

Revisiting the Myths of Protein Interior: Studying Proteins with Mass-Fractal Hydrophobicity-Fractal and Polarizability-Fractal Dimensions

Anirban Banerji, Indira Ghosh

published 16 Oct 2009

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Direct Repeat 6 from Human Herpesvirus-6B Encodes a Nuclear Protein that Forms a Complex with the Viral DNA Processivity Factor p41

Mariane H. Schleimann, Janni M. L. Møller, Emil Kofod-Olsen, Per Höllsberg

published 15 Oct 2009

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Structural and Functional Similarity between the Bacterial Type III Secretion System Needle Protein PrgI and the Eukaryotic Apoptosis Bcl-2 Proteins

Matthew D. Shortridge, Robert Powers

published 13 Oct 2009

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Evolutionary Descent of Prion Genes from the ZIP Family of Metal Ion Transporters

Gerold Schmitt-Ulms, Sepehr Ehsani, Joel C. Watts, David Westaway, Holger Wille

published 28 Sep 2009

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Highly Sensitive Detection of Individual HEAT and ARM Repeats with HHpred and COACH

Fred Kippert, Dietlind L. Gerloff

published 24 Sep 2009

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Solution Structure and Phylogenetics of Prod1, a Member of the Three-Finger Protein Superfamily Implicated in Salamander Limb Regeneration

Acely Garza-Garcia, Richard Harris, Diego Esposito, Phillip B. Gates, Paul C. Driscoll

published 22 Sep 2009

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Prodepth: Predict Residue Depth by Support Vector Regression Approach from Protein Sequences Only

Jiangning Song, Hao Tan, Khalid Mahmood, Ruby H. P. Law, Ashley M. Buckle, Geoffrey I. Webb, Tatsuya Akutsu, James C. Whisstock

published 17 Sep 2009

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HAAD: A Quick Algorithm for Accurate Prediction of Hydrogen Atoms in Protein Structures

Yunqi Li, Ambrish Roy, Yang Zhang

published 20 Aug 2009

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Sex Determination in the Squalius alburnoides Complex: An Initial Characterization of Sex Cascade Elements in the Context of a Hybrid Polyploid Genome

Irene Pala, Manfred Schartl, Sólveig Thorsteinsdóttir, Maria Manuela Coelho

published 28 Jul 2009

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Molecular Analysis of Spring Viraemia of Carp Virus in China: A Fatal Aquatic Viral Disease that Might Spread in East Asian

Nian Zhi Zhang, Li Feng Zhang, Yi Nan Jiang, Ting Zhang, Chun Xia

published 22 Jul 2009

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PSPP: A Protein Structure Prediction Pipeline for Computing Clusters

Michael S. Lee, Rajkumar Bondugula, Valmik Desai, Nela Zavaljevski, In-Chul Yeh, Anders Wallqvist, Jaques Reifman

published 16 Jul 2009

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ProteinArchitect: Protein Evolution above the Sequence Level

Matthias Haimel, Karin Pröll, Michael Rebhan

published 15 Jul 2009

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Functional Equivalency Inferred from “Authoritative Sources” in Networks of Homologous Proteins

Shreedhar Natarajan, Eric Jakobsson

published 12 Jun 2009

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