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Protein structure comparison

Correlation Analysis for Protein Evolutionary Family Based on Amino Acid Position Mutations and Application in PDZ Domain

Qi-Shi Du, Cheng-Hua Wang, Si-Ming Liao, Ri-Bo Huang

published 06 Oct 2010

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The Crystal Structure of the Dachshund Domain of Human SnoN Reveals Flexibility in the Putative Protein Interaction Surface

Tomas Nyman, Lionel Trésaugues, Martin Welin, Lari Lehtiö, Susanne Flodin, Camilla Persson, Ida Johansson, Martin Hammarström, Pär Nordlund

published 23 Sep 2010

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Domain Altering SNPs in the Human Proteome and Their Impact on Signaling Pathways

Yichuan Liu, Aydin Tozeren

published 23 Sep 2010

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Molecular Modeling Study for Interaction between Bacillus subtilis Obg and Nucleotides

Yuno Lee, Woo Young Bang, Songmi Kim, Prettina Lazar, Chul Wook Kim, Jeong Dong Bahk, Keun Woo Lee

published 07 Sep 2010

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Binding of Protein Kinase Inhibitors to Synapsin I Inferred from Pair-Wise Binding Site Similarity Measurements

Enrico De Franchi, Claire Schalon, Mirko Messa, Franco Onofri, Fabio Benfenati, Didier Rognan

published 16 Aug 2010

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Integrating Ion Mobility Mass Spectrometry with Molecular Modelling to Determine the Architecture of Multiprotein Complexes

Argyris Politis, Ah Young Park, Suk-Joon Hyung, Daniel Barsky, Brandon T. Ruotolo, Carol V. Robinson

published 10 Aug 2010

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Superpose3D: A Local Structural Comparison Program That Allows for User-Defined Structure Representations

Pier Federico Gherardini, Gabriele Ausiello, Manuela Helmer-Citterich

published 05 Aug 2010

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NMR Structure of the Human Prion Protein with the Pathological Q212P Mutation Reveals Unique Structural Features

Gregor Ilc, Gabriele Giachin, Mariusz Jaremko, Łukasz Jaremko, Federico Benetti, Janez Plavec, Igor Zhukov, Giuseppe Legname

published 22 Jul 2010

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Benchmarking Multi-Rate Codon Models

Wayne Delport, Konrad Scheffler, Mike B. Gravenor, Spencer V. Muse, Sergei Kosakovsky Pond

published 21 Jul 2010

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Rationalisation of the Differences between APOBEC3G Structures from Crystallography and NMR Studies by Molecular Dynamics Simulations

Flavia Autore, Julien R. C. Bergeron, Michael H. Malim, Franca Fraternali, Hendrik Huthoff

published 12 Jul 2010

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Identifying and Seeing beyond Multiple Sequence Alignment Errors Using Intra-Molecular Protein Covariation

Russell J. Dickson, Lindi M. Wahl, Andrew D. Fernandes, Gregory B. Gloor

published 28 Jun 2010

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Structural and Functional Study of Yer067w, a New Protein Involved in Yeast Metabolism Control and Drug Resistance

Tatiana Domitrovic, Guennadi Kozlov, João Claudio Gonçalves Freire, Claudio Akio Masuda, Marcius da Silva Almeida, Mónica Montero-Lomeli, Georgia Correa Atella, Edna Matta-Camacho, Kalle Gehring, Eleonora Kurtenbach

published 17 Jun 2010

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WD40 Domain Divergence Is Important for Functional Differences between the Fission Yeast Tup11 and Tup12 Co-Repressor Proteins

Monica E. Ferreira, Kurt D. Berndt, Johan Nilsson, Anthony P. H. Wright

published 08 Jun 2010

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