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Protein structure comparison

A Comprehensive Benchmark Study of Multiple Sequence Alignment Methods: Current Challenges and Future Perspectives

Julie D. Thompson, Benjamin Linard, Odile Lecompte, Olivier Poch

published 31 Mar 2011

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CPORT: A Consensus Interface Predictor and Its Performance in Prediction-Driven Docking with HADDOCK

Sjoerd J. de Vries, Alexandre M. J. J. Bonvin

published 25 Mar 2011

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Identification of Local Conformational Similarity in Structurally Variable Regions of Homologous Proteins Using Protein Blocks

Garima Agarwal, Swapnil Mahajan, Narayanaswamy Srinivasan, Alexandre G. de Brevern

published 18 Mar 2011

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Linking Genotype and Phenotype of Saccharomyces cerevisiae Strains Reveals Metabolic Engineering Targets and Leads to Triterpene Hyper-Producers

Karina M. Madsen, Gupta D. B. R. K. Udatha, Saori Semba, Jose M. Otero, Peter Koetter, Jens Nielsen, Yutaka Ebizuka, Tetsuo Kushiro, Gianni Panagiotou

published 18 Mar 2011

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X-Ray Structure of the Human Calreticulin Globular Domain Reveals a Peptide-Binding Area and Suggests a Multi-Molecular Mechanism

Anne Chouquet, Helena Païdassi, Wai Li Ling, Philippe Frachet, Gunnar Houen, Gérard J. Arlaud, Christine Gaboriaud

published 15 Mar 2011

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A Survey of New Temperature-Sensitive, Embryonic-Lethal Mutations in C. elegans: 24 Alleles of Thirteen Genes

Sean M. O'Rourke, Clayton Carter, Luke Carter, Sara N. Christensen, Minh P. Jones, Bruce Nash, Meredith H. Price, Douglas W. Turnbull, Aleena R. Garner, Danielle R. Hamill, Valerie R. Osterberg, Rebecca Lyczak, Erin E. Madison, Michael H. Nguyen, Nathan A. Sandberg, Noushin Sedghi, John H. Willis, John Yochem, Eric A. Johnson, Bruce Bowerman

published 01 Mar 2011

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Insights into the Function of the CRM1 Cofactor RanBP3 from the Structure of Its Ran-Binding Domain

Karla Langer, Cyril Dian, Vladimir Rybin, Christoph W. Müller, Carlo Petosa

published 25 Feb 2011

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Incorporation of Local Structural Preference Potential Improves Fold Recognition

Yun Hu, Xiaoxi Dong, Aiping Wu, Yang Cao, Liqing Tian, Taijiao Jiang

published 18 Feb 2011

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The PE-PPE Domain in Mycobacterium Reveals a Serine α/β Hydrolase Fold and Function: An In-Silico Analysis

Rafiya Sultana, Karunakar Tanneeru, Lalitha Guruprasad

published 10 Feb 2011

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HIV-1 Nef Protein Structures Associated with Brain Infection and Dementia Pathogenesis

Susanna L. Lamers, Art F. Y. Poon, Michael S. McGrath

published 09 Feb 2011

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Single Honeybee Silk Protein Mimics Properties of Multi-Protein Silk

Tara D. Sutherland, Jeffrey S. Church, Xiao Hu, Mickey G. Huson, David L. Kaplan, Sarah Weisman

published 02 Feb 2011

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Landscape Mapping of Functional Proteins in Insulin Signal Transduction and Insulin Resistance: A Network-Based Protein-Protein Interaction Analysis

Chiranjib Chakraborty, Sanjiban S. Roy, Minna J. Hsu, Govindasamy Agoramoorthy

published 31 Jan 2011

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Characterization of the Deleted in Autism 1 Protein Family: Implications for Studying Cognitive Disorders

Azhari Aziz, Sean P. Harrop, Naomi E. Bishop

published 19 Jan 2011

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