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Protein structure comparison

Crystallographic structure determination and analysis of a potential short-chain dehydrogenase/reductase (SDR) from multi-drug resistant Acinetobacter baumannii

Seyed Mohammad Ghafoori, Soha Abdollahpour, Paniz Shirmast, Jade K. Forwood

published 24 Aug 2023

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Structural bioinformatics studies of bacterial outer membrane beta-barrel transporters and their AlphaFold2 predicted water-soluble QTY variants

Akash Sajeev-Sheeja, Eva Smorodina, Shuguang Zhang

published 22 Aug 2023

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DNAJB3 attenuates ER stress through direct interaction with AKT

Zeyaul Islam, Abdoulaye Diane, Namat Khattab, Mohammed Dehbi, Paul Thornalley, Prasanna R. Kolatkar

published 18 Aug 2023

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Molecular investigation of TSHR gene in Bangladeshi congenital hypothyroid patients

Mst. Noorjahan Begum, Rumana Mahtarin, Md. Tarikul Islam, Sinthyia Ahmed, Tasnia Kawsar Konika, Kaiissar Mannoor, Sharif Akhteruzzaman, Firdausi Qadri

published 10 Aug 2023

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Analytical sameness methodology for the evaluation of structural, physicochemical, and biological characteristics of Armlupeg: A pegfilgrastim biosimilar case study

Arati Deshmukh, Rishank Goyal, Kalyana Sundaram, Kaustubh Dange, Tejshri Lakhote, Sanjay Niranjan, Jennifer Bharucha, Ashok Mishra, Bhavesh Vats, Sanjay Tiwari

published 09 Aug 2023

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The AMP deaminase of the mollusk Helix pomatia is an unexpected member of the adenosine deaminase-related growth factor (ADGF) family

George Tzertzinis, Mehul B. Ganatra, Cristian Ruse, Christopher H. Taron, Bryce Causey, Liang Wang, Ira Schildkraut

published 20 Jul 2023

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The difficulty of aligning intrinsically disordered protein sequences as assessed by conservation and phylogeny

Andrew C. Riley, Daniel A. Ashlock, Steffen P. Graether

published 13 Jul 2023

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On closing the inopportune gap with consistency transformation and iterative refinement

Mario João Jr., Alexandre C. Sena, Vinod E. F. Rebello

published 13 Jul 2023

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An amino acid substitution in HCV core antigen limits its use as a reliable measure of HCV infection compared with HCV RNA

Payuda Hansoongnern, Pornpitra Pratedrat, Pornjarim Nilyanimit, Rujipat Wasitthankasem, Nawarat Posuwan, Nasamon Wanlapakorn, Kanchanok Kodchakorn, Prachya Kongtawelert, Napaporn Pimsing, Yong Poovorawan

published 29 Jun 2023

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Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae

Mohd Kashif, Ahad Amer Alsaiari, Bhupendra Kumar, Mohd Asalam, Mohammad Imran Khan, Abrar Ahmad, Rayees Ahmad Lone, Mazen Almehmadi, Mazin A. Zamzami, Mohd Sohail Akhtar

published 13 Jun 2023

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Bioinformatics characterization of BcsA-like orphan proteins suggest they form a novel family of pseudomonad cyclic-β-glucan synthases

Andrew J. Spiers, Helge C. Dorfmueller, Robyn Jerdan, Jessica McGregor, Abbie Nicoll, Kenzie Steel, Scott Cameron

published 02 Jun 2023

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Across atoms to crossing continents: Application of similarity measures to biological location data

Fabian Schuhmann, Leonie Ryvkin, James D. McLaren, Luca Gerhards, Ilia A. Solov’yov

published 15 May 2023

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Mirage2’s high-quality spliced protein-to-genome mappings produce accurate multiple-sequence alignments of isoforms

Alexander J. Nord, Travis J. Wheeler

published 08 May 2023

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