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Protein structure comparison

The Effective Fragment Molecular Orbital Method for Fragments Connected by Covalent Bonds

Casper Steinmann, Dmitri G. Fedorov, Jan H. Jensen

published 23 Jul 2012

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Predictive Sequence Analysis of the Candidatus Liberibacter asiaticus Proteome

Qian Cong, Lisa N. Kinch, Bong-Hyun Kim, Nick V. Grishin

published 18 Jul 2012

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Genomic Organisation, Embryonic Expression and Biochemical Interactions of the Zebrafish Junctional Adhesion Molecule Family of Receptors

Gareth T. Powell, Gavin J. Wright

published 18 Jul 2012

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Protein Surface Matching by Combining Local and Global Geometric Information

Leif Ellingson, Jinfeng Zhang

published 17 Jul 2012

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Analysis of Conformational Variation in Macromolecular Structural Models

Sandeep Kumar Srivastava, Savitha Gayathri, Babu A. Manjasetty, Balasubramanian Gopal

published 09 Jul 2012

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‘Ca. Liberibacter asiaticus’ Proteins Orthologous with pSymA-Encoded Proteins of Sinorhizobium meliloti: Hypothetical Roles in Plant Host Interaction

L. David Kuykendall, Jonathan Y. Shao, John S. Hartung

published 25 Jun 2012

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Common and Distant Structural Characteristics of Feruloyl Esterase Families from Aspergillus oryzae

D. B. R. K. Gupta Udatha, Valeria Mapelli, Gianni Panagiotou, Lisbeth Olsson

published 22 Jun 2012

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Local Structural Differences in Homologous Proteins: Specificities in Different SCOP Classes

Agnel Praveen Joseph, Hélène Valadié, Narayanaswamy Srinivasan, Alexandre G. de Brevern

published 22 Jun 2012

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Prediction of Metal Ion–Binding Sites in Proteins Using the Fragment Transformation Method

Chih-Hao Lu, Yu-Feng Lin, Jau-Ji Lin, Chin-Sheng Yu

published 18 Jun 2012

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How Many Protein-Protein Interactions Types Exist in Nature?

Leonardo Garma, Srayanta Mukherjee, Pralay Mitra, Yang Zhang

published 13 Jun 2012

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AlignNemo: A Local Network Alignment Method to Integrate Homology and Topology

Giovanni Ciriello, Marco Mina, Pietro H. Guzzi, Mario Cannataro, Concettina Guerra

published 12 Jun 2012

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Detecting Mutually Exclusive Interactions in Protein-Protein Interaction Maps

Carmen Sánchez Claros, Anna Tramontano

published 08 Jun 2012

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A Comparative Study of Short Linear Motif Compositions of the Influenza A Virus Ribonucleoproteins

Chu-Wen Yang

published 08 Jun 2012

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