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Protein structure comparison

Identification of critical amino acids in the DNA binding domain of LuxO: Lessons from a constitutive active LuxO

Shradha Surin, Richa Singh, [ ... ], Saumya Raychaudhuri

Unlocking epitope similarity: A comparative analysis of the American manatee (Trichechus manatus) IgA and human IgA through an immuno-informatics approach

Mariapaula Díaz-Yayguaje, Susana Caballero-Gaitan, Augusto Valderrama-Aguirre

AmiR-P³: An AI-based microRNA prediction pipeline in plants

Sobhan Ataei, Jafar Ahmadi, Sayed-Amir Marashi, Ilia Abolhasani

In vitro synthesis and biochemical characterization of acyl-homoserine lactone synthase and its deletion mutant

Yechan Jeong, Sunwoo Moon, Jae-hwa Shin

GTExome: Modeling commonly expressed missense mutations in the human genome

Jill Hoffman, Henry Tan, [ ... ], Scott M. Reed

The molecular interaction of six single-stranded DNA aptamers to cardiac troponin I revealed by docking and molecular dynamics simulation

Bejo Ropii, Maulidwina Bethasari, [ ... ], Muhammad Aziz

AlphaFold2 modeling and molecular dynamics simulations of an intrinsically disordered protein

Hao-Bo Guo, Baxter Huntington, [ ... ], Rajiv Berry

Structural bioinformatics studies of glutamate transporters and their AlphaFold2 predicted water-soluble QTY variants and uncovering the natural mutations of L->Q, I->T, F->Y and Q->L, T->I and Y->F

Alper Karagöl, Taner Karagöl, Eva Smorodina, Shuguang Zhang

Point mutations in Arf1 reveal cooperative effects of the N-terminal extension and myristate for GTPase-activating protein catalytic activity

Eric M. Rosenberg Jr., Xiaoying Jian, [ ... ], Paul A. Randazzo

The impact of genetically controlled splicing on exon inclusion and protein structure

Jonah Einson, Mariia Minaeva, Faiza Rafi, Tuuli Lappalainen

Deciphering the structure of a multi-drug resistant Acinetobacter baumannii short-chain dehydrogenase reductase

Mahdi Abedinzadeh Shahri, Paniz Shirmast, Seyed Mohammad Ghafoori, Jade Kenneth Forwood

Comprehensive characterization of coding and non-coding single nucleotide polymorphisms of the Myoneurin (MYNN) gene using molecular dynamics simulation and docking approaches

Sadia Islam Mou, Tamanna Sultana, [ ... ], Md. Ismail Hosen

Crystal structure of the Arabidopsis SPIRAL2 C-terminal domain reveals a p80-Katanin-like domain

Derek L. Bolhuis, Ram Dixit, Kevin C. Slep

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