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Protein interaction networks

Complexity of hospital demand during the COVID-19 pandemic in Mexico City

Guillermo de Anda-Jáuregui, José Sifuentes-Osornio, Ofelia Angulo-Guerrero, Juan L. Díaz-De-León-Santiago, Héctor Benítez-Pérez, Luis A. Herrera, Oliva López-Arellano, Arturo Revuelta-Herrera, Ana R. Rosales-Tapia, Manuel Suárez-Lastra, David Kershenobich, Rosaura Ruiz-Gutiérrez, Enrique Hernández-Lemus

published 30 Sep 2026

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Network of interactions between the tumor necrosis factor superfamily members and small S100 proteins

Victoria A. Rastrygina, Evgenia I. Deryusheva, Alexey S. Kazakov, Andrey S. Sokolov, Maria E. Permyakova, Ekaterina A. Litus, Vladimir N. Uversky, Eugene A. Permyakov, Sergei E. Permyakov

published 29 Sep 2026

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RA-PLA: Retrieval-augmented graph convolutional networks for protein-ligand binding affinity prediction

Karim Abbasi, Hossein Banadkuki, Reza Sepahvand, Shima Rashidi

published 22 Sep 2026

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Associations between serum lactate and renal dysfunction in diabetic kidney disease: An exploratory analysis integrating animal experiments, clinical cohorts, and bioinformatic approaches

Zongtao Li, Wenyu Zhang, Die Fang, Bingwu Zhao, Tianwei Zhang, Xueqin Zhang, Zhiqiang Chen

published 15 Sep 2026

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Leveraging bioinformatics approaches for drug repositioning in space radiation protection

Thomas E. Diaz, Joseph A. Kerrigan Jr, Dawn E. Bowles, Yared H. Kidane

published 15 Sep 2026

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Network pharmacology and molecular simulation study on the multi-target gene regulatory mechanism of Isatis indigotica against hepatic inflammation

XueRu Li, Yang Wang, HuiJun Cheng, Rong Chen, XiaoLu Chen

published 13 Aug 2026

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A report on the mechanisms of sweeteners in four musculoskeletal disorders: Insights from network toxicology, molecular docking, and molecular dynamics simulations

Tengyao Niu, Xiao Zhang, Ye Jia, Zhe Liu, Donghui Cao, Yanrong Tian, Haifeng Yuan

published 11 Aug 2026

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igraph 1.0 enables fast and robust network analysis across programming languages

Michael Antonov, Gábor Csárdi, Szabolcs Horvát, Kirill Müller, Tamás Nepusz, Daniel Noom, Maëlle Salmon, Vincent Traag, Brooke Foucault Welles, Fabio Zanini

published 04 Aug 2026

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FAERS-based pharmacovigilance and network toxicology analysis of esomeprazole-associated osteoporosis

Yan Wang, Xiaolong Xu, Guanjun Huang, Hongyan Zhu, Xuan Li, Jue Lin

published 04 Aug 2026

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Integrative network pharmacology, transcriptomics, and molecular docking identify candidate Centella asiatica constituents and targets in neurodegenerative diseases

Yuxi Xie, Chong-Teik Lim, Xin-Jieh Lam, Pike-See Cheah, King-Hwa Ling, Tan Huang

published 31 Jul 2026

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The quantitative proteomics analysis of multi-stage gastric mucosal lesions associated with Helicobacter pylori infection

Xiaoxi Huang, Jiamei Ma, Yening Xiao, Jing Pan, Qin Xu, Xifan Cao, Yongchao Liu, Xiang Yi, Fang Tian

published 31 Jul 2026

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Glutamate administration is associated with aggravated atherosclerosis and altered expression of RAPGEF1, OPN, and MYL7 in High-Fat Diet-Fed ApoE⁻/⁻ Mice

Xiuli Cheng, Fanshu Dai, Dilraba Mahmut, Xingya Huang, Qin Wang, Biao Zhang

published 28 Jul 2026

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A systems biology approach to find representative genes in Acute Myeloid Leukemia

Behnam Aghajan, Mohammad Reza Ghaemi, Ali M. Mosammam, Emran Heshmati, Khosrow Khalifeh

published 27 Jul 2026

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