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Microbiome

Application of Two-Part Statistics for Comparison of Sequence Variant Counts

Brandie D. Wagner, Charles E. Robertson, J. Kirk Harris

published 23 May 2011

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The Microbial Communities in Male First Catch Urine Are Highly Similar to Those in Paired Urethral Swab Specimens

Qunfeng Dong, David E. Nelson, Evelyn Toh, Lixia Diao, Xiang Gao, J. Dennis Fortenberry, Barbara Van Der Pol

published 13 May 2011

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CORE: A Phylogenetically-Curated 16S rDNA Database of the Core Oral Microbiome

Ann L. Griffen, Clifford J. Beall, Noah D. Firestone, Erin L. Gross, James M. DiFranco, Jori H. Hardman, Bastienne Vriesendorp, Russell A. Faust, Daniel A. Janies, Eugene J. Leys

published 22 Apr 2011

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The Genome of Akkermansia muciniphila, a Dedicated Intestinal Mucin Degrader, and Its Use in Exploring Intestinal Metagenomes

Mark W. J. van Passel, Ravi Kant, Erwin G. Zoetendal, Caroline M. Plugge, Muriel Derrien, Stephanie A. Malfatti, Patrick S. G. Chain, Tanja Woyke, Airi Palva, Willem M. de Vos, Hauke Smidt

published 03 Mar 2011

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Variability and Diversity of Nasopharyngeal Microbiota in Children: A Metagenomic Analysis

Debby Bogaert, Bart Keijser, Susan Huse, John Rossen, Reinier Veenhoven, Elske van Gils, Jacob Bruin, Roy Montijn, Marc Bonten, Elisabeth Sanders

published 28 Feb 2011

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Analysis of the Lung Microbiome in the “Healthy” Smoker and in COPD

John R. Erb-Downward, Deborah L. Thompson, Meilan K. Han, Christine M. Freeman, Lisa McCloskey, Lindsay A. Schmidt, Vincent B. Young, Galen B. Toews, Jeffrey L. Curtis, Baskaran Sundaram, Fernando J. Martinez, Gary B. Huffnagle

published 22 Feb 2011

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Characteristic Male Urine Microbiomes Associate with Asymptomatic Sexually Transmitted Infection

David E. Nelson, Barbara Van Der Pol, Qunfeng Dong, Kashi V. Revanna, Baochang Fan, Shraddha Easwaran, Erica Sodergren, George M. Weinstock, Lixia Diao, J. Dennis Fortenberry

published 24 Nov 2010

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Characterization of the Fecal Microbiome from Non-Human Wild Primates Reveals Species Specific Microbial Communities

Suleyman Yildirim, Carl J. Yeoman, Maksim Sipos, Manolito Torralba, Brenda A. Wilson, Tony L. Goldberg, Rebecca M. Stumpf, Steven R. Leigh, Bryan A. White, Karen E. Nelson

published 12 Nov 2010

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Microbiome Profiling by Illumina Sequencing of Combinatorial Sequence-Tagged PCR Products

Gregory B. Gloor, Ruben Hummelen, Jean M. Macklaim, Russell J. Dickson, Andrew D. Fernandes, Roderick MacPhee, Gregor Reid

published 26 Oct 2010

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Deep Sequencing of the Vaginal Microbiota of Women with HIV

Ruben Hummelen, Andrew D. Fernandes, Jean M. Macklaim, Russell J. Dickson, John Changalucha, Gregory B. Gloor, Gregor Reid

published 12 Aug 2010

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Risks for Acquisition of Bacterial Vaginosis Among Women Who Report Sex with Women: A Cohort Study

Jeanne M. Marrazzo, Katherine K. Thomas, Tina L. Fiedler, Kathleen Ringwood, David N. Fredricks

published 15 Jun 2010

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Comparative Analysis of Fecal Microbiota in Infants with and without Eczema

Pei-Ying Hong, Bee Wah Lee, Marion Aw, Lynette Pei Chi Shek, Gaik Chin Yap, Kaw Yan Chua, Wen-Tso Liu

published 01 Apr 2010

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Phylogenetic Characterization of Fecal Microbial Communities of Dogs Fed Diets with or without Supplemental Dietary Fiber Using 454 Pyrosequencing

Ingmar S. Middelbos, Brittany M. Vester Boler, Ani Qu, Bryan A. White, Kelly S. Swanson, George C. Fahey Jr.

published 22 Mar 2010

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