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Microbial genomics

MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping

Wan-Ping Lee, Michael P. Stromberg, [ ... ], Gabor T. Marth

Filthy lucre: A metagenomic pilot study of microbes found on circulating currency in New York City

Julia M. Maritz, Steven A. Sullivan, [ ... ], Jane M. Carlton

Dynamic Gut Microbiome across Life History of the Malaria Mosquito Anopheles gambiae in Kenya

Ying Wang, Thomas M. Gilbreath III, [ ... ], Jiannong Xu

SDT: A Virus Classification Tool Based on Pairwise Sequence Alignment and Identity Calculation

Brejnev Muhizi Muhire, Arvind Varsani, Darren Patrick Martin

The Complete Genome Sequence of the Plant Growth-Promoting Bacterium Pseudomonas sp. UW4

Jin Duan, Wei Jiang, [ ... ], Bernard R. Glick

Comparison of DNA Extraction Methods for Microbial Community Profiling with an Application to Pediatric Bronchoalveolar Lavage Samples

Dana Willner, Joshua Daly, [ ... ], Philip Hugenholtz

The RelA/SpoT Homolog (RSH) Superfamily: Distribution and Functional Evolution of ppGpp Synthetases and Hydrolases across the Tree of Life

Gemma C. Atkinson, Tanel Tenson, Vasili Hauryliuk

Deep Sequencing Identifies Ethnicity-Specific Bacterial Signatures in the Oral Microbiome

Matthew R. Mason, Haikady N. Nagaraja, [ ... ], Purnima S. Kumar

Non Mycobacterial Virulence Genes in the Genome of the Emerging Pathogen Mycobacterium abscessus

Fabienne Ripoll, Sophie Pasek, [ ... ], Jean-Louis Gaillard

VirusFinder: Software for Efficient and Accurate Detection of Viruses and Their Integration Sites in Host Genomes through Next Generation Sequencing Data

Qingguo Wang, Peilin Jia, Zhongming Zhao

Understanding Cultivar-Specificity and Soil Determinants of the Cannabis Microbiome

Max E. Winston, Jarrad Hampton-Marcell, [ ... ], S. M. Gibbons

Novel Bacterial Taxa in the Human Microbiome

Kristine M. Wylie, Rebecca M. Truty, [ ... ], Katherine S. Pollard

Survival of Influenza A(H1N1) on Materials Found in Households: Implications for Infection Control

Jane S. Greatorex, Paul Digard, [ ... ], Jonathan S. Nguyen-Van-Tam

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