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Microbial genomics

Evidence for an indigenous female mouse urobiome

Sidra Sohail, Daniel Bushnell, Mark Khemmani, Sridhar Narla, Olivia Lamana, Bhanu Sharma, Robert B. Moreland, Alan J. Wolfe, Catherine S. Forster

published 05 Nov 2025

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Public perceptions of biospecimen sampling and uncertainty in the context of personalised nutrition

Katharine Lee, Estelle Corbett, Rebecca Hafner, Julie Barnett

published 04 Nov 2025

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Genomic characteristics of Lacticaseibacillus rhamnosus strains isolated from blood

Piotr Jarocki, Jan Sadurski, Martyna Siuda, Mateusz Romanowicz, Jacek Panek, Magdalena Frąc, Adam Waśko

published 31 Oct 2025

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Characterisation of the bacterial and archaeal microbiota in fresh colostrum collected from a single, spring-calving dairy herd

Sabine Scully, Bernadette Earley, Paul E. Smith, Matthew S. J. Finnie, Catherine McAloon, Frank Buckley, David A. Kenny, Sinéad M. Waters

published 30 Oct 2025

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Keystone active bacterial lineages associated with Penaeus stylirostris shrimp health across larvae stages

Nolwenn Callac, Nelly Wabete, Carolane Giraud, Valérie Perez, Dominique Ansquer, Jean-Sébastien Lam, Dominique Pham, Viviane Boulo

published 29 Oct 2025

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Whole genome sequence of multidrug-resistant Staphylococcus haemolyticus and Enterococcus faecalis isolates from public gymnasium equipment reveals evolving infection potential and resistance

Goutam Banerjee, Pratik Banerjee

published 29 Oct 2025

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Temporal establishment of the colon microbiota in Angus calves from birth to post-weaning

Michelle M. Stafford, Paul E. Smith, Sinead M. Waters, Frank Buckley, Steven McLoughlin, Stuart F. Kirwan, Eoin O’Hara, David A. Kenny

published 28 Oct 2025

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Chaetomium, Chlonostachys, and Pseudogymnoascus isolates from tomato tissues significantly suppress Phytophthora infestans in tomato

Philemon Orwa, Theresa Kuhl-Nagel, Rosa Meinhold-Ernst, Arne Seyer, Johannes A. Jehle, Romano Mwirichia, Ada Linkies

published 24 Oct 2025

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The genome of Gallaecimonas pentaromativorans strain 10A, isolated from a Pacific oyster, sheds light on an environmentally widespread genus with remarkable metabolic potential

Yasmine Gouin, Adam Wilcockson, Amy M. Chan, Curtis A. Suttle, Kevin Xu Zhong

published 21 Oct 2025

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Alterations in the serum metabolome in patients with the COVID-19 Omicron variant and in recovered cases

Feng Gao, Daming Wang, Lihua Zuo, Junyi Sun, Bowen Dong, Ranran Sun, Yingying Shi, Ying Sun, Yawen Zou, Qingquan Jia, Na Han, Haiyu Wang, Liwen Liu, Guizhen Zhang, Zujiang Yu, Zhi Sun, Zhigang Ren

published 14 Oct 2025

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Differential composition of the pulmonary microbiome in HIV-positive versus HIV-negative patients with Pneumocystis jirovecii

Chang-Run Zhang, Mei Wang, Lei Wang, Li Liu, Yi-Dan Shen, Rui-Fang Chen, Shuai Ren, Wei-Zhong Jin, Hai-Cheng Tang, Qing-Guo Wu

published 10 Oct 2025

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Public perceptions and support for introduced microbes to combat hospital-acquired infections and antimicrobial resistance

Christopher L. Cummings, Kristen D. Landreville, Jennifer Kuzma

published 08 Oct 2025

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Microbiome characterization of a pre-Hispanic man from Zimapán, Mexico: Insights into ancient gut microbial communities

Santiago Rosas-Plaza, Luisa Mainou, Gabriela Delgado, Rosario Morales, Ariana Aguilar-Romero, Ana E. Escalante, Rene Cerritos

published 08 Oct 2025

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