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Microbial genomics

Effects of pica practice on oral bacteriome and mycobiome profiles among pregnant women: A comparative study

Brenda A. Z. Abu, Lanxin Zhang, Robert Beblavy, Yan Wu, Xingyi Lu, Kevin Fiscella, Michael B. Sohn, Jin Xiao

published 08 May 2026

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Non-concussive head impacts sustained during American football correlate with changes in gut microbiome diversity and composition

Zachary J. Pelland, Aziz Zafar, Ahmet A. Ay, Kenneth Douglas Belanger

published 06 May 2026

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Streptococcus didelphis infection in free-ranging white-eared opossum (Didelphis albiventris) and Brazilian common opossum (Didelphis aurita): pathology, microbiologic, and genomic characterization

Daniel Oliveira dos Santos, Yasmin Gonçalves de Castro, André Duarte Vieira, Bruna Hermine de Campos, Lucas dos Reis de Souza, Nayara Ferreira de Paula, Vasco Azevedo, Bertram Brenig, Caio de Castro Cunha Figueiredo, Letícia Neves Ribeiro, Janaína Ribeiro Duarte, Vinícius Henrique Barbosa Amaral, Carlyle Mendes Coelho, Herlandes Penha Tinoco, Marcelo Pires Nogueira Carvalho, Ayisa Rodrigues de Oliveira, Rodrigo Otávio Silveira Silva, Renato Lima Santos

published 30 Apr 2026

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Direct LAMP for on-site rapid detection of Vibrio parahaemolyticus in shrimp (Litopenaeus vannamei) aquaculture water

Xiaodan Pu, Feng Lu, Qianqian Yang, Zhenyu Han, Xueting Zhu, Jianlei Chen, Dahai Zhang, Xuzhi Zhang

published 29 Apr 2026

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Diet and gut microbiome of skipjack tuna (Katsuwonus pelamis) as indicators of environmental changes

Yufei Zhou, Alejandro Trujillo-González, Simon Nicol, Roger Huerlimann, Stephen D. Sarre, Dianne Gleeson

published 27 Apr 2026

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Gut microbiome alterations among Ghanaian children with asymptomatic malaria infections

Amma Aboagyewa Larbi, Moses Etsey, Obed Brew, Bismark Koduah, Rosemond Enam Mawuenyega, Emmanuel Kobla Atsu Amewu, Nehemiah Kweku Essilfie, Solomon Wireko, Alexander Kwarteng, Ben Adu Gyan

published 24 Apr 2026

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Detecting apple replant disease in the field – deciphering reasons for local growth depression

Anne-Sophie Wachter, Kristin Hauschild, Benye Liu, Patrick Schnoor, Elke Bloem, Andreas Wrede, Rolf Hornig, Ludger Beerhues, Steffen Schlüter, Kornelia Smalla, Traud Winkelmann, Doris Vetterlein

published 21 Apr 2026

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Identification of an optimal exogenous gene insertion site (P–M) and establishment of a reverse genetics system for aMPV/A

Yu Guo, Ting Xue, Bingqing Lu, Jiqing Zheng, Yirong Wang, Xueqiao Xie, Huiting Wang, Furui Cao, Yijun Zhang, Jianhua Wang

published 20 Apr 2026

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Genome analysis of Lactiplantibacillus plantarum and Levilactobacillus brevis isolated from traditionally fermented Ethiopian kocho and their probiotic properties

Guesh Mulaw, Teklemichael Tesfay, Tesfaye Sisay, Diriba Muleta, Débora Brito Goulart, Olabisi Flora Davies-Bolorunduro, Chioma Ohaeri, Nirupama Narayanan

published 20 Apr 2026

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The neuroactive potential of the elderly human gut microbiome is associated with mental health status

Paulina Calderón-Romero, Benjamin Valderrama, Thomaz F. S. Bastiaanssen, Patricia Lillo, Daniela Thumala-Dockendorff, Gerard Clarke, John F. Cryan, Andrea Slachevsky, Christian González-Billault, Felipe A. Court

published 15 Apr 2026

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Predicted meta-omics: A potential solution to multi-omics data scarcity in microbiome studies

Bianca-Maria Cosma, Stephanie Pillay, David Calderón-Franco, Thomas Abeel

published 10 Apr 2026

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Molecular identification and microbiome profiling of household casebearer, Phereoeca sp. (Lepidoptera: Tineidae) from Malaysia: Potential implications for human skin irritation

Salmah Yaakop, Muhammad Afiq Senen, Nur Alya Adila Rosli, Muhamad Azmi Mohammed

published 09 Apr 2026

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FAVABEAN and FALAPhyl: Open-source pipelines for scalable 16s rRNA microbiome data processing and visualization

Afnan Faridoun, Ramon Carvalho, Jacob Smith, Andrew Gibb, Lavanya Jain, Annie Zhang, Ajay Sran, Johanna Redmond, Mohammad Zubbair Malik, Monica Gibson, Anum Haider, Umar Rekhi, Anjali Bhagirath, Leigha D. Rock, Khaled Altabtbaei

published 07 Apr 2026

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