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Microbial genomics

Whole-genome sequencing of Burkholderia glumae strains from Thailand reveals potential horizontal gene transfer with Burkholderia pseudomallei

Sujin Patarapuwadol, Woranich Hintong, Pornpavee Nualnisachol, Natnicha Wankaew, Worarat Kruasuwan, Thanchanok Sawaengwong, Phatcharin Laosena, Jiraphan Premsuriya

published 31 Dec 2025

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Candidate orphan genes: Reassessing uniqueness

Sheetalpreet K. Maan, Xuan Y. Butzin, Steven X. Ge, Nicholas C. Butzin

published 31 Dec 2025

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Exploring gut microbiome and nutritional status among children with Autism Spectrum Disorder (MY-ASD Microbiome): A study protocol

Kai Xuan Wong, Seong Ting Chen, Jun Jean Ong, Wan Ying Gan, Nor Azian Abdul Murad, Chun Wie Chong, Nurul Hanis Ramzi

published 31 Dec 2025

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Systematic analysis of spontaneous tandem genome amplification events in Yersinia pestis

Dmitry N. Konanov, Olga N. Liubimova, Alexander V. Kovrizhnikov, Ignat V. Sonets, Alina N. Balykova, Alexandra V. Lukina-Gronskaya, Anna S. Speranskaya, Danil V. Krivonos, Galina A. Eroshenko, Elena N. Ilina, Vadim M. Govorun, Vladimir V. Kutyrev

published 31 Dec 2025

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Transformation of Tn7 insertion elements across strains of Vibrio fischeri

Andrew G. Cecere, Chris Muriel-Mundo, Derek J. Fisher, Tim I. Miyashiro

published 30 Dec 2025

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Assessment of the midgut microbiota in foragers of the stingless bee Melipona scutellaris following short-term sublethal exposure to imidacloprid

Patricia Azevedo, Lucas Miotelo, Manuela Oliveira Ramalho, Tatiane Caroline Grella, Osmar Malaspina, Matthew Hudson, Roberta Cornélio Ferreira Nocelli, Maria Imaculada Zucchi

published 29 Dec 2025

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Isolation and characterization of four novel Vibrio parahaemolyticus bacteriophages from oysters

Joud Aldaroub, Chrissy M. Walsky, Rylee E. Ewell, Frank O. Aylward, Ann M. Stevens, Alison Kernell Burke

published 29 Dec 2025

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Centriflaken: An automated data analysis pipeline for assembly and in silico analyses of foodborne pathogens from metagenomic samples

Kranti Konganti, Julie A. Kase, Narjol Gonzalez-Escalona

published 23 Dec 2025

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The relationships between box turtle gut microbiomes and personality

Kaija Harlow, Elizabeth K. Service, Jace E. Geiger, Bradley E. Carlson, Steven J.A. Kimble

published 19 Dec 2025

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Development of a competition assay to assess the in vitro fitness of dengue virus serotypes using an optimized serotype-specific qRT-PCR

Anne-Fleur Griffon, Loeïza Rault, Clément Tanvet, Etienne Simon-Lorière, Myrielle Dupont-Rouzeyrol, Catherine Inizan

published 15 Dec 2025

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Whole-genome analysis of Lysinibacillus boronitolerans MSR1: A dairy-isolated multidrug-resistant and non-pathogenic strain

Md. Shahedur Rahman, Md. Tofidul Islam, Mahadi Hasan, Md. Tariquzzaman, Nure Sharaf Nower Samia, Md. Mahfuzur Rahman, Mustafizur Rahman

published 12 Dec 2025

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Epigenome analysis of an algae-infecting giant virus reveals a unique methylation motif catalogue

Alexander R. Truchon, Erik R. Zinser, Steven W. Wilhelm

published 12 Dec 2025

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Effects of risperidone on amino acid metabolism, glucose, and kidney function in healthy adults: A pilot randomized controlled trial

Megumi Oshima, Tadashi Toyama, Yusuke Nakade, Sakae Miyagi, Hisayuki Ogura, Shiori Nakagawa, Takahiro Yuasa, Akihiko Koshino, Keisuke Horikoshi, Taichiro Minami, Keisuke Sako, Shunsuke Tsuge, Akira Tamai, Ryo Nishioka, Taro Miyagawa, Kiyoaki Ito, Shinji Kitajima, Ichiro Mizushima, Akinori Hara, Norihiko Sakai, Miho Shimizu, Toshiaki Tokumaru, Makoto Tsubomoto, Mitsuru Kikuchi, Masashi Kinoshita, Mitsutoshi Nakada, Masashi Mita, Yasunori Iwata, Takashi Wada

published 05 Dec 2025

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