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Microbial genomics

SARS-CoV-2 detection is independent of microbiome composition on surfaces in a major Ontario hospital

Nikhil A. George, Lauren Bradford, [ ... ], Laura A. Hug

Streptococcus didelphis infection in free-ranging white-eared opossum (Didelphis albiventris) and Brazilian common opossum (Didelphis aurita): pathology, microbiologic, and genomic characterization

Daniel Oliveira dos Santos, Yasmin Gonçalves de Castro, [ ... ], Renato Lima Santos

Genomic and functional characterization of a novel halophilic bacteriophage targeting carbapenem-resistant Klebsiella pneumoniae

Sahar Abed, Masoumeh Beig, [ ... ], Abozar Ghorbani

Distribution and evolution of the LysR-type transcriptional regulators of the Salmonella genus

Dávila S., Rivera-Ramírez A., [ ... ], Hernández-Lucas I.

Cloacal microbiome variation in wild and captive Eastern Indigo Snakes (Drymarchon couperi) with and without Cryptosporidium serpentis infection

Christopher Roger Brown, Mark Nikolaus Yacoub, [ ... ], Zachary J. Loughman

Beyond the host: Unveiling the independent microbiome of equine gastrointestinal nematodes

Fabio Gentilini, Tolulope Grace Ogundipe, [ ... ], Laura Stancampiano

Covariation between air chiller and chicken product microbiota in a poultry processing facility

Birgitte Moen, Annette Fagerlund, [ ... ], Solveig Langsrud

Microbiome analysis of bronchoalveolar lavage (BAL) specimens from immunocompromised patients with pneumonia compared to those from healthy volunteers

Zareen Fatima, Matthew D. Surette, [ ... ], Mohammad Rubayet Hasan

FAVABEAN and FALAPhyl: Open-source pipelines for scalable 16s rRNA microbiome data processing and visualization

Afnan Faridoun, Ramon Carvalho, [ ... ], Khaled Altabtbaei

Detection of Coxsackievirus A24v during an acute haemorrhagic conjunctivitis outbreak in Dar es Salaam, Tanzania, January-February 2024

Lawrence A. Mapunda, Peter van Heusden, [ ... ], Nyambura Moremi

Virological investigation and comparative genomic analysis of elephant endotheliotropic herpesvirus 1B infection in an Australian captive herd of Asian elephants (Elephas maximus)

Jack W. Wheelahan, Paola K. Vaz, [ ... ], Joanne M. Devlin

Study protocol: Dental and periodontal characteristics of older adults in Atahualpa, Ecuador within the Atahualpa Project cohort

Marcelo Armijos Briones, Patricia Estefanía Ayala Aguirre, [ ... ], Oscar H. Del Brutto

Insights into spatial dynamics of the microbiome and resistome across the conventional and organic dairy farms

Kabilan Mani, Vignesh Palanisamy, [ ... ], Sapna Chitlapilly Dass

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