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Microbial genomics

A novel oncolytic vaccinia virus with multiple gene modifications involved in viral replication and maturation increases safety for intravenous administration while maintaining proliferative potential in cancer cells

Go Okita, Kiyotaka Suenaga, Masashi Sakaguchi, Toshio Murakami

published 06 Mar 2025

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The impact of perinatal maternal stress on the maternal and infant gut and human milk microbiomes: A scoping review

Niamh Ryan, Siobhain O’Mahony, Patricia Leahy-Warren, Lloyd Philpott, Helen Mulcahy

published 28 Feb 2025

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The alteration of uterine microbiota participated in the activation of the decidual inflammatory response in early spontaneous abortion

Ping Liu, Ge Chen, Shitong Zhao, Linglingli Kong, Xin Liao, Meng Cheng

published 24 Feb 2025

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Isolation and characterization of 24 phages infecting the plant growth-promoting rhizobacterium Klebsiella sp. M5al

Marissa R. Gittrich, Courtney M. Sanderson, James M. Wainaina, Cara M. Noel, Jonathan E. Leopold, Erica Babusci, Sumeyra C. Selbes, Olivia R. Farinas, Jack Caine, Joshua Davis II, Vivek K. Mutalik, Paul Hyman, Matthew B. Sullivan

published 21 Feb 2025

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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site

Rebecca A. Reiss, Peter A. Guerra, Oleg Makhnin, Matthew Kellom

published 14 Feb 2025

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Bacterial profiles of the oral, vaginal, and rectal mucosa and colostrum of periparturient sows

Virpi Piirainen, Emilia König, Aleksi Husso, Mari Heinonen, Antti Iivanainen, Tiina Pessa-Morikawa, Mikael Niku

published 12 Feb 2025

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Bacterial targets of fecal host miRNAs in high-fat diet-fed mice

Laila Silamiķele, Ivars Silamiķelis, Patrīcija Paulīne Kotoviča, Jānis Kloviņš

published 11 Feb 2025

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Unveiling microbial succession dynamics on different plastic surfaces using WGCNA

Keren Davidov, Sheli Itzahri, Liat Anabel Sinberger, Matan Oren

published 06 Feb 2025

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Comparative analysis of grape berry microbiota uncovers sour rot associates from a Maryland vineyard

Blaise Jumbam, Magaly Toro, Mengjun Hu

published 06 Feb 2025

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The urinary microbiome in association with diabetes and diabetic kidney disease: A systematic review

Tiscar Graells, Yi-Ting Lin, Shafqat Ahmad, Tove Fall, Johan Ärnlöv

published 31 Jan 2025

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AutoPVPrimer: A comprehensive AI-Enhanced pipeline for efficient plant virus primer design and assessment

Abozar Ghorbani, Mahsa Rostami, Elham Ashrafi-Dehkordi, Pietro Hiram Guzzi

published 30 Jan 2025

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Revolutionizing colorectal cancer detection: A breakthrough in microbiome data analysis

Mwenge Mulenga, Arutchelvan Rajamanikam, Suresh Kumar, Saharuddin bin Muhammad, Subha Bhassu, Chandramathi Samudid, Aznul Qalid Md Sabri, Manjeevan Seera, Christopher Ifeanyi Eke

published 29 Jan 2025

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Nebulization of 2% lidocaine has no detectable impact on the healthy equine respiratory microbiota

Lauren Holley, Hannah N. Creasey, Daniela Bedenice, Sarah Reed, Debora Regina Romualdo da Silva, Victoria Trautwein, Melissa Mazan, Giovanni Widmer

published 24 Jan 2025

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