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Microbial genomics

Linking the Composition of Bacterial and Archaeal Communities to Characteristics of Soil and Flora Composition in the Atlantic Rainforest

Julia Elidia Lima-Perim, Emiliana Manesco Romagnoli, Francisco Dini-Andreote, Ademir Durrer, Armando Cavalcante Franco Dias, Fernando Dini Andreote

published 11 Jan 2016

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Intestinal Microbiota in Patients with Spinal Cord Injury

Bilgi Gungor, Emre Adiguzel, Ihsan Gursel, Bilge Yilmaz, Mayda Gursel

published 11 Jan 2016

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Resistant Starch Alters the Microbiota-Gut Brain Axis: Implications for Dietary Modulation of Behavior

Mark Lyte, Ashley Chapel, Joshua M. Lyte, Yongfeng Ai, Alexandra Proctor, Jay-Lin Jane, Gregory J. Phillips

published 08 Jan 2016

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Comparative Analysis of Xenorhabdus koppenhoeferi Gene Expression during Symbiotic Persistence in the Host Nematode

Ruisheng An, Parwinder S. Grewal

published 08 Jan 2016

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Predominance of Single Prophage Carrying a CRISPR/cas System in “Candidatus Liberibacter asiaticus” Strains in Southern China

Zheng Zheng, Minli Bao, Fengnian Wu, Jianchi Chen, Xiaoling Deng

published 07 Jan 2016

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New Insights into Asian Prunus Viruses in the Light of NGS-Based Full Genome Sequencing

Armelle Marais, Chantal Faure, Thierry Candresse

published 07 Jan 2016

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The Gut Microbiome Is Altered in a Letrozole-Induced Mouse Model of Polycystic Ovary Syndrome

Scott T. Kelley, Danalea V. Skarra, Alissa J. Rivera, Varykina G. Thackray

published 05 Jan 2016

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A Novel Method to Predict Genomic Islands Based on Mean Shift Clustering Algorithm

Daniel M. de Brito, Vinicius Maracaja-Coutinho, Savio T. de Farias, Leonardo V. Batista, Thaís G. do Rêgo

published 05 Jan 2016

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Pglyrp-Regulated Gut Microflora Prevotella falsenii, Parabacteroides distasonis and Bacteroides eggerthii Enhance and Alistipes finegoldii Attenuates Colitis in Mice

Roman Dziarski, Shin Yong Park, Des Raj Kashyap, Scot E. Dowd, Dipika Gupta

published 04 Jan 2016

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Epigenetic Segregation of Microbial Genomes from Complex Samples Using Restriction Endonucleases HpaII and McrB

Guohong Liu, Christopher Q. Weston, Long K. Pham, Shannon Waltz, Helen Barnes, Paula King, Dan Sphar, Robert T. Yamamoto, R. Allyn Forsyth

published 04 Jan 2016

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Application of a Novel “Pan-Genome”-Based Strategy for Assigning RNAseq Transcript Reads to Staphylococcus aureus Strains

Diego Chaves-Moreno, Melissa L. Wos-Oxley, Ruy Jáuregui, Eva Medina, Andrew P. A. Oxley, Dietmar H. Pieper

published 30 Dec 2015

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Selective Spectrum Antibiotic Modulation of the Gut Microbiome in Obesity and Diabetes Rodent Models

Deepak K. Rajpal, Jean-Louis Klein, David Mayhew, Joyce Boucheron, Aaron T. Spivak, Vinod Kumar, Karen Ingraham, Mark Paulik, Lihong Chen, Stephanie Van Horn, Elizabeth Thomas, Ganesh Sathe, George P. Livi, David J. Holmes, James R. Brown

published 28 Dec 2015

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PredβTM: A Novel β-Transmembrane Region Prediction Algorithm

Amrita Roy Choudhury, Marjana Novič

published 22 Dec 2015

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