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Microbial genomics

A Study of the Infant Nasal Microbiome Development over the First Year of Life and in Relation to Their Primary Adult Caregivers Using cpn60 Universal Target (UT) as a Phylogenetic Marker

Shelley W. Peterson, Natalie C. Knox, George R. Golding, Shaun D. Tyler, Andrea D. Tyler, Philip Mabon, Joanne E. Embree, Fiona Fleming, Sergio Fanella, Gary Van Domselaar, Michael R. Mulvey, Morag R. Graham

published 28 Mar 2016

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A Transcriptome Map of Actinobacillus pleuropneumoniae at Single-Nucleotide Resolution Using Deep RNA-Seq

Zhipeng Su, Jiawen Zhu, Zhuofei Xu, Ran Xiao, Rui Zhou, Lu Li, Huanchun Chen

published 28 Mar 2016

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Microbial Diversity and Parasitic Load in Tropical Fish of Different Environmental Conditions

Philipp Hennersdorf, Sonja Kleinertz, Stefan Theisen, Muslihudeen A. Abdul-Aziz, Grit Mrotzek, Harry W. Palm, Hans Peter Saluz

published 28 Mar 2016

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PCR-Based Seamless Genome Editing with High Efficiency and Fidelity in Escherichia coli

Yilan Liu, Maohua Yang, Jinjin Chen, Daojiang Yan, Wanwan Cheng, Yanyan Wang, Anders Thygesen, Ruonan Chen, Jianmin Xing, Qinhong Wang, Yanhe Ma

published 28 Mar 2016

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Genome Analysis of Planctomycetes Inhabiting Blades of the Red Alga Porphyra umbilicalis

Jay W. Kim, Susan H. Brawley, Simon Prochnik, Mansi Chovatia, Jane Grimwood, Jerry Jenkins, Kurt LaButti, Konstantinos Mavromatis, Matt Nolan, Matthew Zane, Jeremy Schmutz, John W. Stiller, Arthur R. Grossman

published 25 Mar 2016

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Relative Importance and Additive Effects of Maternal and Infant Risk Factors on Childhood Asthma

Pingsheng Wu, Amy S. Feldman, Christian Rosas-Salazar, Kristina James, Gabriel Escobar, Tebeb Gebretsadik, Sherian Xu Li, Kecia N. Carroll, Eileen Walsh, Edward Mitchel, Suman Das, Rajesh Kumar, Chang Yu, William D. Dupont, Tina V. Hartert

published 22 Mar 2016

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Informing the Historical Record of Experimental Nonhuman Primate Infections with Ebola Virus: Genomic Characterization of USAMRIID Ebola Virus/H.sapiens-tc/COD/1995/Kikwit-9510621 Challenge Stock “R4368” and Its Replacement “R4415”

Jeffrey R. Kugelman, Cynthia A. Rossi, Michael R. Wiley, Jason T. Ladner, Elyse R. Nagle, Bradley P. Pfeffer, Karla Garcia, Karla Prieto, Jiro Wada, Jens H. Kuhn, Gustavo Palacios

published 22 Mar 2016

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Molecular Evolution and Spatial Transmission of Severe Fever with Thrombocytopenia Syndrome Virus Based on Complete Genome Sequences

Jian-Wei Liu, Li Zhao, Li-Mei Luo, Miao-Miao Liu, Yue Sun, Xiang Su, Xue-jie Yu

published 21 Mar 2016

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Identification and Analysis of Novel Viral and Host Dysregulated MicroRNAs in Variant Pseudorabies Virus-Infected PK15 Cells

Fei Liu, Hao Zheng, Wu Tong, Guo-Xin Li, Qing Tian, Chao Liang, Li-Wei Li, Xu-Chen Zheng, Guang-Zhi Tong

published 21 Mar 2016

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Helicobacter pylori Eradication Causes Perturbation of the Human Gut Microbiome in Young Adults

Theresa Wan-Chen Yap, Han-Ming Gan, Yin-Peng Lee, Alex Hwong-Ruey Leow, Ahmad Najib Azmi, Fritz Francois, Guillermo I. Perez-Perez, Mun-Fai Loke, Khean-Lee Goh, Jamuna Vadivelu

published 18 Mar 2016

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A Next-Generation Sequencing Data Analysis Pipeline for Detecting Unknown Pathogens from Mixed Clinical Samples and Revealing Their Genetic Diversity

Yu-Nong Gong, Guang-Wu Chen, Shu-Li Yang, Ching-Ju Lee, Shin-Ru Shih, Kuo-Chien Tsao

published 17 Mar 2016

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REPdenovo: Inferring De Novo Repeat Motifs from Short Sequence Reads

Chong Chu, Rasmus Nielsen, Yufeng Wu

published 15 Mar 2016

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Influences of Plant Species, Season and Location on Leaf Endophytic Bacterial Communities of Non-Cultivated Plants

Tao Ding, Ulrich Melcher

published 14 Mar 2016

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