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Microbial genomics

Gut microbiome alterations among Ghanaian children with asymptomatic malaria infections

Amma Aboagyewa Larbi, Moses Etsey, Obed Brew, Bismark Koduah, Rosemond Enam Mawuenyega, Emmanuel Kobla Atsu Amewu, Nehemiah Kweku Essilfie, Solomon Wireko, Alexander Kwarteng, Ben Adu Gyan

published 24 Apr 2026

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Detecting apple replant disease in the field – deciphering reasons for local growth depression

Anne-Sophie Wachter, Kristin Hauschild, Benye Liu, Patrick Schnoor, Elke Bloem, Andreas Wrede, Rolf Hornig, Ludger Beerhues, Steffen Schlüter, Kornelia Smalla, Traud Winkelmann, Doris Vetterlein

published 21 Apr 2026

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Identification of an optimal exogenous gene insertion site (P–M) and establishment of a reverse genetics system for aMPV/A

Yu Guo, Ting Xue, Bingqing Lu, Jiqing Zheng, Yirong Wang, Xueqiao Xie, Huiting Wang, Furui Cao, Yijun Zhang, Jianhua Wang

published 20 Apr 2026

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Genome analysis of Lactiplantibacillus plantarum and Levilactobacillus brevis isolated from traditionally fermented Ethiopian kocho and their probiotic properties

Guesh Mulaw, Teklemichael Tesfay, Tesfaye Sisay, Diriba Muleta, Débora Brito Goulart, Olabisi Flora Davies-Bolorunduro, Chioma Ohaeri, Nirupama Narayanan

published 20 Apr 2026

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The neuroactive potential of the elderly human gut microbiome is associated with mental health status

Paulina Calderón-Romero, Benjamin Valderrama, Thomaz F. S. Bastiaanssen, Patricia Lillo, Daniela Thumala-Dockendorff, Gerard Clarke, John F. Cryan, Andrea Slachevsky, Christian González-Billault, Felipe A. Court

published 15 Apr 2026

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Predicted meta-omics: A potential solution to multi-omics data scarcity in microbiome studies

Bianca-Maria Cosma, Stephanie Pillay, David Calderón-Franco, Thomas Abeel

published 10 Apr 2026

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Molecular identification and microbiome profiling of household casebearer, Phereoeca sp. (Lepidoptera: Tineidae) from Malaysia: Potential implications for human skin irritation

Salmah Yaakop, Muhammad Afiq Senen, Nur Alya Adila Rosli, Muhamad Azmi Mohammed

published 09 Apr 2026

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FAVABEAN and FALAPhyl: Open-source pipelines for scalable 16s rRNA microbiome data processing and visualization

Afnan Faridoun, Ramon Carvalho, Jacob Smith, Andrew Gibb, Lavanya Jain, Annie Zhang, Ajay Sran, Johanna Redmond, Mohammad Zubbair Malik, Monica Gibson, Anum Haider, Umar Rekhi, Anjali Bhagirath, Leigha D. Rock, Khaled Altabtbaei

published 07 Apr 2026

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Comparative fecal microbiome analysis of the endangered Volcano rabbit (Romerolagus diazi) reveals a microbial core in contrasting habitats of Central Mexico

Leslie M. Montes-Carreto, Hanya D. Arellano-Hernández, José Antonio Guerrero, Esperanza Martinez-Romero

published 26 Mar 2026

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Exploring anatomical and geographical drivers of the microbiota in wild capybaras (Hydrochoerus hydrochaeris): Baseline Data for zoonotic risk assessment

Milena Camargo, Jorge A. Marín-Sánchez, Plutarco Urbano, Nicolas Luna, Valentina Acevedo Ramírez, Julián A. Rodríguez, Davinzon Martínez, Carlos Porras, Luz H. Patiño, Marina Muñoz, Juan David Ramírez

published 23 Mar 2026

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Study protocol: Dental and periodontal characteristics of older adults in Atahualpa, Ecuador within the Atahualpa Project cohort

Marcelo Armijos Briones, Patricia Estefanía Ayala Aguirre, Pablo Lenin Benitez Sellan, Antonio Lanata-Flores, Oscar Marcillo-Toala, Denisse A. Rumbea, Robertino M. Mera, Oscar H. Del Brutto

published 19 Mar 2026

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Single-tube two-step RPA-CRISPR/Cas12b platform for detection of Pseudomonas aeruginosa

Haotian Lin, Shichun Wang, Yuanhong Xie, Congyang Cheng, Junhua Jin, Xiaodong Song, Hongxing Zhang

published 18 Mar 2026

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Distribution and evolution of the LysR-type transcriptional regulators of the Salmonella genus

Dávila S., Rivera-Ramírez A., Gama-Martínez Y., Orozco R., Hernández V. M., Hernández-Lucas I.

published 17 Mar 2026

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