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Marker genes

Single-cell analysis of a high-grade serous ovarian cancer cell line reveals transcriptomic changes and cell subpopulations sensitive to epigenetic combination treatment

Shruthi Sriramkumar, Tara X. Metcalfe, Tim Lai, Xingyue Zong, Fang Fang, Heather M. O’Hagan, Kenneth P. Nephew

published 03 Aug 2022

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Single-nucleus RNA-sequencing in pre-cellularization Drosophila melanogaster embryos

Ashley R. Albright, Michael R. Stadler, Michael B. Eisen

published 24 Jun 2022

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Predicting mechanical ventilation effects on six human tissue transcriptomes

Judith Somekh, Nir Lotan, Ehud Sussman, Gur Arye Yehuda

published 10 Mar 2022

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Isolating and cryopreserving pig skin cells for single-cell RNA sequencing study

Li Han, Carlos P. Jara, Ou Wang, Yu Shi, Xinran Wu, Sandra Thibivilliers, Rafał K. Wóycicki, Mark A. Carlson, William H. Velander, Eliana P. Araújo, Marc Libault, Chi Zhang, Yuguo Lei

published 17 Feb 2022

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Development of a 3-transcript host expression assay to differentiate between viral and bacterial infections in pigs

Bernt Hjertner, Claudia Lützelschwab, Elise Schieck, Benjamin Nzau, Sonal Henson, Marie Sjölund, Caroline Fossum, Ulf Magnusson

published 23 Sep 2021

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Machine learning predicts treatment sensitivity in multiple myeloma based on molecular and clinical information coupled with drug response

Lucas Venezian Povoa, Carlos Henrique Costa Ribeiro, Israel Tojal da Silva

published 28 Jul 2021

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Single-cell transcriptome analysis of the zebrafish embryonic trunk

Sanjeeva Metikala, Satish Casie Chetty, Saulius Sumanas

published 07 Jul 2021

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Revealing immune responses in the Mycobacterium avium subsp. paratuberculosis-infected THP-1 cells using single cell RNA-sequencing

Hong-Tae Park, Woo Bin Park, Suji Kim, Jong-Sung Lim, Gyoungju Nah, Han Sang Yoo

published 02 Jul 2021

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A single-molecule counting approach for convenient and ultrasensitive measurement of restriction digest efficiencies

Yi Zhang, Takuro Nunoura, Daisuke Nishiura, Miho Hirai, Shigeru Shimamura, Kanako Kurosawa, Chieko Ishiwata, Shigeru Deguchi

published 31 Dec 2020

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Age-associated changes in the transcriptomes of non-cultured adipose-derived stem cells from young and old mice assessed via single-cell transcriptome analysis

Yuta Doshida, Haruka Sano, Sadahiro Iwabuchi, Toshiro Aigaki, Masayuki Yoshida, Shinichi Hashimoto, Akihito Ishigami

published 25 Nov 2020

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Bias of marker genes in PCR of anammox bacteria in natural habitats

Min Cai, Fei Ye, Jiapeng Wu, Qihang Wu, Yu Wang, Yiguo Hong

published 01 Oct 2020

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Reproducibility across single-cell RNA-seq protocols for spatial ordering analysis

Morten Seirup, Li-Fang Chu, Srikumar Sengupta, Ning Leng, Hadley Browder, Kevin Kapadia, Christina M. Shafer, Bret Duffin, Angela L. Elwell, Jennifer M. Bolin, Scott Swanson, Ron Stewart, Christina Kendziorski, James A. Thomson, Rhonda Bacher

published 28 Sep 2020

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Introduction of a leaky stop codon as molecular tool in Chlamydomonas reinhardtii

Oliver D. Caspari

published 20 Aug 2020

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