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Hidden Markov models

Normalization of High Dimensional Genomics Data Where the Distribution of the Altered Variables Is Skewed

Mattias Landfors, Philge Philip, Patrik Rydén, Per Stenberg

Evolution of Plant Nucleotide-Sugar Interconversion Enzymes

Yanbin Yin, Jinling Huang, [ ... ], Ying Xu

Origins and Evolution of the HET-s Prion-Forming Protein: Searching for Other Amyloid-Forming Solenoids

Deena M. A. Gendoo, Paul M. Harrison

An Alignment-Free Approach for Eukaryotic ITS2 Annotation and Phylogenetic Inference

Guillermin Agüero-Chapin, Aminael Sánchez-Rodríguez, [ ... ], Agostinho Antunes

Bioinformatic Analysis Reveals High Diversity of Bacterial Genes for Laccase-Like Enzymes

Luka Ausec, Martha Zakrzewski, [ ... ], Ines Mandic-Mulec

Identification of Plasmodium vivax Proteins with Potential Role in Invasion Using Sequence Redundancy Reduction and Profile Hidden Markov Models

Daniel Restrepo-Montoya, David Becerra, [ ... ], Manuel A. Patarroyo

A Hidden Markov Model for Analysis of Frontline Veterinary Data for Emerging Zoonotic Disease Surveillance

Colin Robertson, Kate Sawford, [ ... ], Craig Stephen

Complex Sequencing Rules of Birdsong Can be Explained by Simple Hidden Markov Processes

Kentaro Katahira, Kenta Suzuki, Kazuo Okanoya, Masato Okada

Multicoil2: Predicting Coiled Coils and Their Oligomerization States from Sequence in the Twilight Zone

Jason Trigg, Karl Gutwin, Amy E. Keating, Bonnie Berger

The RelA/SpoT Homolog (RSH) Superfamily: Distribution and Functional Evolution of ppGpp Synthetases and Hydrolases across the Tree of Life

Gemma C. Atkinson, Tanel Tenson, Vasili Hauryliuk

Transmission Dynamics of Methicillin-Resistant Staphylococcus aureus in a Medical Intensive Care Unit in India

Solomon Christopher, Rejina Mariam Verghis, [ ... ], Ben Symons Cooper

Explicit-Duration Hidden Markov Model Inference of UP-DOWN States from Continuous Signals

James M. McFarland, Thomas T. G. Hahn, Mayank R. Mehta

Elucidation of Functional Markers from Aspergillus nidulans Developmental Regulator FlbB and Their Phylogenetic Distribution

Marc S. Cortese, Oier Etxebeste, [ ... ], Unai Ugalde

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