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Hidden Markov models

A Bioinformatic Strategy for the Detection, Classification and Analysis of Bacterial Autotransporters

Nermin Celik, Chaille T. Webb, [ ... ], Trevor Lithgow

Identifying Protein Phosphorylation Sites with Kinase Substrate Specificity on Human Viruses

Neil Arvin Bretaña, Cheng-Tsung Lu, [ ... ], Shun-Long Weng

A Comparison of Gene Region Simulation Methods

Audrey E. Hendricks, Josée Dupuis, [ ... ], Kathryn L. Lunetta

Beyond Captions: Linking Figures with Abstract Sentences in Biomedical Articles

Joseph P. Bockhorst, John M. Conroy, [ ... ], Hong Yu

Classification of HIV-1 Sequences Using Profile Hidden Markov Models

Sanjiv K. Dwivedi, Supratim Sengupta

The Impact of Errors in Copy Number Variation Detection Algorithms on Association Results

Nathan E. Wineinger, Hemant K. Tiwari

Statistical Inference of In Vivo Properties of Human DNA Methyltransferases from Double-Stranded Methylation Patterns

Audrey Q. Fu, Diane P. Genereux, [ ... ], Matthew Stephens

Single Molecule Analysis Research Tool (SMART): An Integrated Approach for Analyzing Single Molecule Data

Max Greenfeld, Dmitri S. Pavlichin, Hideo Mabuchi, Daniel Herschlag

Accounting For Alignment Uncertainty in Phylogenomics

Martin Wu, Sourav Chatterji, Jonathan A. Eisen

A New Method for Inferring Hidden Markov Models from Noisy Time Sequences

David Kelly, Mark Dillingham, Andrew Hudson, Karoline Wiesner

The Origin of GPCRs: Identification of Mammalian like Rhodopsin, Adhesion, Glutamate and Frizzled GPCRs in Fungi

Arunkumar Krishnan, Markus Sällman Almén, Robert Fredriksson, Helgi B. Schiöth

GlyGly-CTERM and Rhombosortase: A C-Terminal Protein Processing Signal in a Many-to-One Pairing with a Rhomboid Family Intramembrane Serine Protease

Daniel H. Haft, Neha Varghese

Decoding Sequence Learning from Single-Trial Intracranial EEG in Humans

Marzia De Lucia, Irina Constantinescu, [ ... ], Sophie Schwartz

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