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Genomic libraries

A Microfluidic DNA Library Preparation Platform for Next-Generation Sequencing

Hanyoup Kim, Mais J. Jebrail, [ ... ], Kamlesh D. Patel

Fine De Novo Sequencing of a Fungal Genome Using only SOLiD Short Read Data: Verification on Aspergillus oryzae RIB40

Myco Umemura, Yoshinori Koyama, [ ... ], Masayuki Machida

Microsatellites for Next-Generation Ecologists: A Post-Sequencing Bioinformatics Pipeline

Iria Fernandez-Silva, Jonathan Whitney, [ ... ], Stephen A. Karl

Consequences of Normalizing Transcriptomic and Genomic Libraries of Plant Genomes Using a Duplex-Specific Nuclease and Tetramethylammonium Chloride

Marta Matvienko, Alexander Kozik, [ ... ], Richard Michelmore

HTS-PEG: A Method for High Throughput Sequencing of the Paired-Ends of Genomic Libraries

Sisi Zhou, Yonggui Fu, [ ... ], Anlong Xu

FastUniq: A Fast De Novo Duplicates Removal Tool for Paired Short Reads

Haibin Xu, Xiang Luo, [ ... ], Shilin Chen

C911: A Bench-Level Control for Sequence Specific siRNA Off-Target Effects

Eugen Buehler, Yu-Chi Chen, Scott Martin

The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation

Konstantinos Mavromatis, Miriam L. Land, [ ... ], Nikos C. Kyrpides

Exploring Pandora's Box: Potential and Pitfalls of Low Coverage Genome Surveys for Evolutionary Biology

Florian Leese, Philipp Brand, [ ... ], Chester J. Sands

Long Span DNA Paired-End-Tag (DNA-PET) Sequencing Strategy for the Interrogation of Genomic Structural Mutations and Fusion-Point-Guided Reconstruction of Amplicons

Fei Yao, Pramila N. Ariyaratne, [ ... ], Yijun Ruan

Paired-End Sequencing of Long-Range DNA Fragments for De Novo Assembly of Large, Complex Mammalian Genomes by Direct Intra-Molecule Ligation

Asan, Chunyu Geng, [ ... ], Xiuqing Zhang

SNP Discovery with EST and NextGen Sequencing in Switchgrass (Panicum virgatum L.)

Elhan S. Ersoz, Mark H. Wright, [ ... ], Denise E. Costich

Selective Depletion of rRNA Enables Whole Transcriptome Profiling of Archival Fixed Tissue

John D. Morlan, Kunbin Qu, Dominick V. Sinicropi

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