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Genomic databases

Immune diversity sheds light on missing variation in worldwide genetic diversity panels

Laurent Abi-Rached, Philippe Gouret, Jung-Hua Yeh, Julie Di Cristofaro, Pierre Pontarotti, Christophe Picard, Julien Paganini

published 26 Oct 2018

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De Novo assembly, characterization and development of EST-SSRs from Bletilla striata transcriptomes profiled throughout the whole growing period

Delin Xu, Hongbo Chen, Murat Aci, Yinchi Pan, Yanni Shangguan, Jie Ma, Lin Li, Gang Qian, Qianxing Wang

published 26 Oct 2018

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Overlapping genes and the proteins they encode differ significantly in their sequence composition from non-overlapping genes

Angelo Pavesi, Alberto Vianelli, Nicola Chirico, Yiming Bao, Olga Blinkova, Robert Belshaw, Andrew Firth, David Karlin

published 19 Oct 2018

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miRWalk: An online resource for prediction of microRNA binding sites

Carsten Sticht, Carolina De La Torre, Alisha Parveen, Norbert Gretz

published 18 Oct 2018

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A most wanted list of conserved microbial protein families with no known domains

Stacia K. Wyman, Aram Avila-Herrera, Stephen Nayfach, Katherine S. Pollard

published 17 Oct 2018

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Microbial community and functions associated with digestion of algal polysaccharides in the visceral tract of Haliotis discus hannai: Insights from metagenome and metatranscriptome analysis

Bo-Hye Nam, Jisung Jang, Kelsey Caetano-Anolles, Young-Ok Kim, Jung Youn Park, Hawsun Sohn, Sook Hee Yoon, Heebal Kim, Woori Kwak

published 11 Oct 2018

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The collaborative effect of scientific meetings: A study of the International Milk Genomics Consortium

Eric Kwok, Matthew Porter, Ian Korf, Gonca Pasin, J. Bruce German, Danielle G. Lemay

published 22 Aug 2018

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Genome-wide analysis of ATP binding cassette (ABC) transporters in tomato

Peter Amoako Ofori, Ayaka Mizuno, Mami Suzuki, Enrico Martinoia, Stefan Reuscher, Koh Aoki, Daisuke Shibata, Shungo Otagaki, Shogo Matsumoto, Katsuhiro Shiratake

published 26 Jul 2018

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Consensus assessment of the contamination level of publicly available cyanobacterial genomes

Luc Cornet, Loïc Meunier, Mick Van Vlierberghe, Raphaël R. Léonard, Benoit Durieu, Yannick Lara, Agnieszka Misztak, Damien Sirjacobs, Emmanuelle J. Javaux, Hervé Philippe, Annick Wilmotte, Denis Baurain

published 25 Jul 2018

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Candidate gene biodosimetry markers of exposure to external ionizing radiation in human blood: A systematic review

Jerome Lacombe, Chao Sima, Sally A. Amundson, Frederic Zenhausern

published 07 Jun 2018

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Gene cloning of a neutral ceramidase from the sphingolipid metabolic pathway based on transcriptome analysis of Amorphophallus muelleri

Lin Zhong, Erxi Liu, Chaozhu Yang, Ying Diao, Nunung Harijati, Jiangdong Liu, Zhongli Hu, Surong Jin

published 28 Mar 2018

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Identification of fungi in shotgun metagenomics datasets

Paul D. Donovan, Gabriel Gonzalez, Desmond G. Higgins, Geraldine Butler, Kimihito Ito

published 14 Feb 2018

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Comparing fixed sampling with minimizer sampling when using k-mer indexes to find maximal exact matches

Meznah Almutairy, Eric Torng

published 01 Feb 2018

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