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Genomic databases

IMSA: Integrated Metagenomic Sequence Analysis for Identification of Exogenous Reads in a Host Genomic Background

Michelle T. Dimon, Henry M. Wood, Pamela H. Rabbitts, Sarah T. Arron

Transcriptome of Pneumocystis carinii during Fulminate Infection: Carbohydrate Metabolism and the Concept of a Compatible Parasite

Melanie T. Cushion, A. George Smulian, [ ... ], Jarek Meller

PrionHome: A Database of Prions and Other Sequences Relevant to Prion Phenomena

Djamel Harbi, Marimuthu Parthiban, [ ... ], Paul M. Harrison

A Statistical Framework for Accurate Taxonomic Assignment of Metagenomic Sequencing Reads

Hongmei Jiang, Lingling An, [ ... ], Yuqing Qiu

Immune diversity sheds light on missing variation in worldwide genetic diversity panels

Laurent Abi-Rached, Philippe Gouret, [ ... ], Julien Paganini

T346Hunter: A Novel Web-Based Tool for the Prediction of Type III, Type IV and Type VI Secretion Systems in Bacterial Genomes

Pedro Manuel Martínez-García, Cayo Ramos, Pablo Rodríguez-Palenzuela

Dr.seq2: A quality control and analysis pipeline for parallel single cell transcriptome and epigenome data

Chengchen Zhao, Sheng’en Hu, Xiao Huo, Yong Zhang

Whole Genome Re-Sequencing and Characterization of Powdery Mildew Disease-Associated Allelic Variation in Melon

Sathishkumar Natarajan, Hoy-Taek Kim, [ ... ], Ill-Sup Nou

Sequencing and Bioinformatics-Based Analyses of the microRNA Transcriptome in Hepatitis B–Related Hepatocellular Carcinoma

Yoshiaki Mizuguchi, Takuya Mishima, [ ... ], Toshihiro Takizawa

MiR-433 and miR-127 Arise from Independent Overlapping Primary Transcripts Encoded by the miR-433-127 Locus

Guisheng Song, Li Wang

WGSQuikr: Fast Whole-Genome Shotgun Metagenomic Classification

David Koslicki, Simon Foucart, Gail Rosen

Identification of Novel Viruses Using VirusHunter -- an Automated Data Analysis Pipeline

Guoyan Zhao, Siddharth Krishnamurthy, [ ... ], David Wang

A Compendium of Canine Normal Tissue Gene Expression

Joseph Briggs, Melissa Paoloni, [ ... ], Chand Khanna

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