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Genomic databases

Advanced biofilm analysis in streams receiving organic deicer runoff

Michelle A. Nott, Heather E. Driscoll, [ ... ], Scott W. Tighe

Characterization of the diverse plasmid pool harbored by the bla_NDM-1-containing Acinetobacter bereziniae HPC229 clinical strain

Marco Brovedan, Guillermo D. Repizo, [ ... ], Adriana Limansky

ProphET, prophage estimation tool: A stand-alone prophage sequence prediction tool with self-updating reference database

João L. Reis-Cunha, Daniella C. Bartholomeu, [ ... ], Gustavo C. Cerqueira

Genomic characterisation of perinatal Western Australian Streptococcus agalactiae isolates

Lucy L. Furfaro, Barbara J. Chang, Charlene M. Kahler, Matthew S. Payne

Phylogenetic microbiota profiling in fecal samples depends on combination of sequencing depth and choice of NGS analysis method

Sukithar K. Rajan, Mårten Lindqvist, [ ... ], Dirk Repsilber

Control of human testis-specific gene expression

Jay C. Brown

VarWatch—A stand-alone software tool for variant matching

Broder Fredrich, Marcus Schmöhl, [ ... ], Michael Krawczak

Integration of heterogeneous functional genomics data in gerontology research to find genes and pathway underlying aging across species

Jason A. Bubier, George L. Sutphin, [ ... ], Elissa J. Chesler

GenomeGraphR: A user-friendly open-source web application for foodborne pathogen whole genome sequencing data integration, analysis, and visualization

Moez Sanaa, Régis Pouillot, [ ... ], Jane M. Van Doren

HuVarBase: A human variant database with comprehensive information at gene and protein levels

Kaliappan Ganesan, A. Kulandaisamy, S. Binny Priya, M. Michael Gromiha

Proteotyping bacteria: Characterization, differentiation and identification of pneumococcus and other species within the Mitis Group of the genus Streptococcus by tandem mass spectrometry proteomics

Roger Karlsson, Lucia Gonzales-Siles, [ ... ], Edward R. B. Moore

An improved DNA array-based classification method for the identification of Salmonella serotypes shows high concordance between traditional and genotypic testing

James Robertson, Catherine Yoshida, [ ... ], John H. E. Nash

An open-source k-mer based machine learning tool for fast and accurate subtyping of HIV-1 genomes

Stephen Solis-Reyes, Mariano Avino, Art Poon, Lila Kari

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