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Genomic databases

Identification of the significant pathways of Banxia Houpu decoction in the treatment of depression based on network pharmacology

Zi-ying Chen, Dan-feng Xie, Zhi-yuan Liu, Yong-qi Zhong, Jing-yan Zeng, Zheng Chen, Xin-lin Chen

published 30 Sep 2020

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Single-molecule real-time sequencing of the full-length transcriptome of loquat under low-temperature stress

Cuiping Pan, Yongqing Wang, Lian Tao, Hui Zhang, Qunxian Deng, Zhiwu Yang, Zhuoheng Chi, Yunmiao Yang

published 11 Sep 2020

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MISTIC: A prediction tool to reveal disease-relevant deleterious missense variants

Kirsley Chennen, Thomas Weber, Xavière Lornage, Arnaud Kress, Johann Böhm, Julie Thompson, Jocelyn Laporte, Olivier Poch

published 31 Jul 2020

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ShAn: An easy-to-use tool for interactive and integrated variant annotation

Venkat Subramaniam Rathinakannan, Hannu-Pekka Schukov, Samuel Heron, Johanna Schleutker, Csilla Sipeky

published 07 Jul 2020

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The genome, transcriptome, and proteome of the fish parasite Pomphorhynchus laevis (Acanthocephala)

Katharina Mauer, Sören Lukas Hellmann, Marco Groth, Andreas C. Fröbius, Hans Zischler, Thomas Hankeln, Holger Herlyn

published 23 Jun 2020

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Isolation of a novel species in the genus Cupriavidus from a patient with sepsis using whole genome sequencing

Oh Joo Kweon, Yong Kwan Lim, Hye Ryoun Kim, Tae-Hyoung Kim, Sung-min Ha, Mi-Kyung Lee

published 13 May 2020

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Weirdo19ES is a novel singleton mycobacteriophage that selects for glycolipid deficient phage-resistant M. smegmatis mutants

Cristian Alejandro Suarez, Jorgelina Judith Franceschelli, Sabrina Emilse Tasselli, Héctor Ricardo Morbidoni

published 01 May 2020

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Advancing clinical cohort selection with genomics analysis on a distributed platform

Jaclyn M. Smith, Melvin Lathara, Hollis Wright, Brian Hill, Nalini Ganapati, Ganapati Srinivasa, Christopher T. Denny

published 23 Apr 2020

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Identification of a novel archaea virus, detected in hydrocarbon polluted Hungarian and Canadian samples

János Molnár, Balázs Magyar, György Schneider, Krisztián Laczi, Sarshad K. Valappil, Árpád L. Kovács, Ildikó K. Nagy, Gábor Rákhely, Tamás Kovács

published 17 Apr 2020

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Identification of NUDT15 gene variants in Amazonian Amerindians and admixed individuals from northern Brazil

Juliana Carla Gomes Rodrigues, Tatiane Piedade de Souza, Lucas Favacho Pastana, André Maurício Ribeiro dos Santos, Marianne Rodrigues Fernandes, Pablo Pinto, Alayde Vieira Wanderley, Sandro José de Souza, José Eduardo Kroll, Adenilson Leão Pereira, Leandro Magalhães, Laís Reis das Mercês, Amanda Ferreira Vidal, Tatiana Vinasco-Sandoval, Giovanna Chaves Cavalcante, João Farias Guerreiro, Paulo Pimentel de Assumpção, Ândrea Ribeiro-dos-Santos, Sidney Santos, Ney Pereira Carneiro dos Santos

published 15 Apr 2020

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A restriction enzyme reduced representation sequencing approach for low-cost, high-throughput metagenome profiling

Melanie K. Hess, Suzanne J. Rowe, Tracey C. Van Stijn, Hannah M. Henry, Sharon M. Hickey, Rudiger Brauning, Alan F. McCulloch, Andrew S. Hess, Michelle R. Kirk, Sandeep Kumar, Cesar Pinares-Patiño, Sandra Kittelmann, Graham R. Wood, Peter H. Janssen, John C. McEwan

published 03 Apr 2020

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Evolving public views on the value of one’s DNA and expectations for genomic database governance: Results from a national survey

Forrest Briscoe, Ifeoma Ajunwa, Allison Gaddis, Jennifer McCormick

published 11 Mar 2020

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All of gene expression (AOE): An integrated index for public gene expression databases

Hidemasa Bono

published 24 Jan 2020

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