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Genomic databases

The effects of sampling on the efficiency and accuracy of k−mer indexes: Theoretical and empirical comparisons using the human genome

Meznah Almutairy, Eric Torng

Genome taxonomy of the genus Neptuniibacter and proposal of Neptuniibacter victor sp. nov. isolated from sea cucumber larvae

Rika Kudo, Ryota Yamano, [ ... ], Tomoo Sawabe

Bioinformatics for Dentistry: A secondary database for the genetics of tooth development

Ava K. Chow, Rachel Low, [ ... ], Nazlee Sharmin

Annotations of novel antennae-expressed genes in male Glossina morsitans morsitans tsetse flies

Billiah K. Bwana, Paul O. Mireji, [ ... ], Ahmed Hassanali

Prometheus, an omics portal for interkingdom comparative genomic analyses

Gunhwan Ko, Insu Jang, [ ... ], Yong-Min Kim

Transposable element insertions in 1000 Swedish individuals

Kristine Bilgrav Saether, Daniel Nilsson, [ ... ], Anna Lindstrand

A machine learning-based typing scheme refinement for Listeria monocytogenes core genome multilocus sequence typing with high discriminatory power for common source outbreak tracking

Yen-Yi Liu, Chih-Chieh Chen

Genomic analysis of Elsinoë arachidis reveals its potential pathogenic mechanism and the biosynthesis pathway of elsinochrome toxin

Wenli Jiao, Mengxue Xu, [ ... ], Caiyun Xue

An improved DNA array-based classification method for the identification of Salmonella serotypes shows high concordance between traditional and genotypic testing

James Robertson, Catherine Yoshida, [ ... ], John H. E. Nash

Measuring quality of DNA sequence data via degradation

Alan F. Karr, Jason Hauzel, Adam A. Porter, Marcel Schaefer

Are the predicted known bacterial strains in a sample really present? A case study

Minerva Ventolero, Saidi Wang, Haiyan Hu, Xiaoman Li

Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site

Rebecca A. Reiss, Peter A. Guerra, Oleg Makhnin, Matthew Kellom

Network analysis retrieving bioactive compounds from Spirulina (Arthrospira platensis) and their targets related to systemic lupus erythematosus

Amnart Chaiprasert, Ping Han, Teeraphan Laomettachit, Marasri Ruengjitchatchawalya

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