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Genomic databases

Genome-Wide Functional Analysis of the Cotton Transcriptome by Creating an Integrated EST Database

Fuliang Xie, Guiling Sun, John W. Stiller, Baohong Zhang

published 08 Nov 2011

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Segtor: Rapid Annotation of Genomic Coordinates and Single Nucleotide Variations Using Segment Trees

Gabriel Renaud, Pedro Neves, Edson Luiz Folador, Carlos Gil Ferreira, Fabio Passetti

published 01 Nov 2011

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SNPpy - Database Management for SNP Data from Genome Wide Association Studies

Faheem Mitha, Herodotos Herodotou, Nedyalko Borisov, Chen Jiang, Josh Yoder, Kouros Owzar

published 19 Oct 2011

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Very Few RNA and DNA Sequence Differences in the Human Transcriptome

Daniel R. Schrider, Jean-Francois Gout, Matthew W. Hahn

published 12 Oct 2011

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Bioinformatic Analysis Reveals High Diversity of Bacterial Genes for Laccase-Like Enzymes

Luka Ausec, Martha Zakrzewski, Alexander Goesmann, Andreas Schlüter, Ines Mandic-Mulec

published 12 Oct 2011

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HIVsirDB: A Database of HIV Inhibiting siRNAs

Atul Tyagi, Firoz Ahmed, Nishant Thakur, Arun Sharma, Gajendra P. S. Raghava, Manoj Kumar

published 11 Oct 2011

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pubmed2ensembl: A Resource for Mining the Biological Literature on Genes

Joachim Baran, Martin Gerner, Maximilian Haeussler, Goran Nenadic, Casey M. Bergman

published 29 Sep 2011

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Substrate Type Determines Metagenomic Profiles from Diverse Chemical Habitats

Thomas C. Jeffries, Justin R. Seymour, Jack A. Gilbert, Elizabeth A. Dinsdale, Kelly Newton, Sophie S. C. Leterme, Ben Roudnew, Renee J. Smith, Laurent Seuront, James G. Mitchell

published 23 Sep 2011

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Randomizing Genome-Scale Metabolic Networks

Areejit Samal, Olivier C. Martin

published 14 Jul 2011

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PanSNPdb: The Pan-Asian SNP Genotyping Database

Chumpol Ngamphiw, Anunchai Assawamakin, Shuhua Xu, Philip J. Shaw, Jin Ok Yang, Ho Ghang, Jong Bhak, Edison Liu, Sissades Tongsima, and the HUGO Pan-Asian SNP Consortium

published 23 Jun 2011

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MultiMSOAR 2.0: An Accurate Tool to Identify Ortholog Groups among Multiple Genomes

Guanqun Shi, Meng-Chih Peng, Tao Jiang

published 21 Jun 2011

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Translational Database Selection and Multiplexed Sequence Capture for Up Front Filtering of Reliable Breast Cancer Biomarker Candidates

Patrik L. Ståhl, Magnus K. Bjursell, Hovsep Mahdessian, Sophia Hober, Karin Jirström, Joakim Lundeberg

published 15 Jun 2011

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A Compendium of Canine Normal Tissue Gene Expression

Joseph Briggs, Melissa Paoloni, Qing-Rong Chen, Xinyu Wen, Javed Khan, Chand Khanna

published 31 May 2011

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