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Genomic databases

Annotation of the Transcriptome from Taenia pisiformis and Its Comparative Analysis with Three Taeniidae Species

Deying Yang, Yan Fu, [ ... ], Guangyou Yang

Fast and Accurate Taxonomic Assignments of Metagenomic Sequences Using MetaBin

Vineet K. Sharma, Naveen Kumar, Tulika Prakash, Todd D. Taylor

A Genome-Wide Identification Analysis of Small Regulatory RNAs in Mycobacterium tuberculosis by RNA-Seq and Conservation Analysis

Danilo Pellin, Paolo Miotto, [ ... ], Clelia Di Serio

Fast and Robust Characterization of Time-Heterogeneous Sequence Evolutionary Processes Using Substitution Mapping

Jonathan Romiguier, Emeric Figuet, [ ... ], Vincent Ranwez

microPIR: An Integrated Database of MicroRNA Target Sites within Human Promoter Sequences

Jittima Piriyapongsa, Chaiwat Bootchai, Chumpol Ngamphiw, Sissades Tongsima

Specific versus Non-Specific Immune Responses in an Invertebrate Species Evidenced by a Comparative de novo Sequencing Study

Emeline Deleury, Géraldine Dubreuil, [ ... ], Christine Coustau

QServer: A Biclustering Server for Prediction and Assessment of Co-Expressed Gene Clusters

Fengfeng Zhou, Qin Ma, Guojun Li, Ying Xu

Reducing False-Positive Prediction of Minimotifs with a Genetic Interaction Filter

Jerlin C. Merlin, Sanguthevar Rajasekaran, Tian Mi, Martin R. Schiller

PrionHome: A Database of Prions and Other Sequences Relevant to Prion Phenomena

Djamel Harbi, Marimuthu Parthiban, [ ... ], Paul M. Harrison

CAPRG: Sequence Assembling Pipeline for Next Generation Sequencing of Non-Model Organisms

Arun Rawat, Mohamed O. Elasri, [ ... ], Edward J. Perkins

Minimal Absent Words in Four Human Genome Assemblies

Sara P. Garcia, Armando J. Pinho

Analysis of Transcriptome Differences between Resistant and Susceptible Strains of the Citrus Red Mite Panonychus citri (Acari: Tetranychidae)

Bin Liu, Gaofei Jiang, [ ... ], Chun Ran

MetaBinG: Using GPUs to Accelerate Metagenomic Sequence Classification

Peng Jia, Liming Xuan, Lei Liu, Chaochun Wei

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