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Genomic databases

The First Illumina-Based De Novo Transcriptome Sequencing and Analysis of Safflower Flowers

Huang Lulin, Yang Xiao, [ ... ], Hu Shangqin

Improving Disease Gene Prioritization by Comparing the Semantic Similarity of Phenotypes in Mice with Those of Human Diseases

Anika Oellrich, Robert Hoehndorf, Georgios V. Gkoutos, Dietrich Rebholz-Schuhmann

Optimizing Read Mapping to Reference Genomes to Determine Composition and Species Prevalence in Microbial Communities

John Martin, Sean Sykes, [ ... ], Makedonka Mitreva

Comparative Analysis of the 5S rRNA and Its Associated Proteins Reveals Unique Primitive Rather Than Parasitic Features in Giardia lamblia

Jin-Mei Feng, Jun Sun, De-Dong Xin, Jian-Fan Wen

arrayMap: A Reference Resource for Genomic Copy Number Imbalances in Human Malignancies

Haoyang Cai, Nitin Kumar, Michael Baudis

Experimental Incubations Elicit Profound Changes in Community Transcription in OMZ Bacterioplankton

Frank J. Stewart, Tage Dalsgaard, [ ... ], Edward F. DeLong

MycoRRdb: A Database of Computationally Identified Regulatory Regions within Intergenic Sequences in Mycobacterial Genomes

Mohit Midha, Nirmal K. Prasad, Vaibhav Vindal

Capturing Single Cell Genomes of Active Polysaccharide Degraders: An Unexpected Contribution of Verrucomicrobia

Manuel Martinez-Garcia, David M. Brazel, [ ... ], Ramunas Stepanauskas

Annotation of the Transcriptome from Taenia pisiformis and Its Comparative Analysis with Three Taeniidae Species

Deying Yang, Yan Fu, [ ... ], Guangyou Yang

Fast and Accurate Taxonomic Assignments of Metagenomic Sequences Using MetaBin

Vineet K. Sharma, Naveen Kumar, Tulika Prakash, Todd D. Taylor

A Genome-Wide Identification Analysis of Small Regulatory RNAs in Mycobacterium tuberculosis by RNA-Seq and Conservation Analysis

Danilo Pellin, Paolo Miotto, [ ... ], Clelia Di Serio

Fast and Robust Characterization of Time-Heterogeneous Sequence Evolutionary Processes Using Substitution Mapping

Jonathan Romiguier, Emeric Figuet, [ ... ], Vincent Ranwez

microPIR: An Integrated Database of MicroRNA Target Sites within Human Promoter Sequences

Jittima Piriyapongsa, Chaiwat Bootchai, Chumpol Ngamphiw, Sissades Tongsima

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