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Genomic databases

Evaluation of Three Automated Genome Annotations for Halorhabdus utahensis

Peter Bakke, Nick Carney, [ ... ], A. Malcolm Campbell

A Reference Methylome Database and Analysis Pipeline to Facilitate Integrative and Comparative Epigenomics

Qiang Song, Benjamin Decato, [ ... ], Andrew D. Smith

Optimizing Read Mapping to Reference Genomes to Determine Composition and Species Prevalence in Microbial Communities

John Martin, Sean Sykes, [ ... ], Makedonka Mitreva

Investigation of mutations in the HBB gene using the 1,000 genomes database

Tânia Carlice-dos-Reis, Jaime Viana, [ ... ], Ândrea Ribeiro-dos-Santos

Diverse and Widespread Contamination Evident in the Unmapped Depths of High Throughput Sequencing Data

Richard W. Lusk

The “Most Wanted” Taxa from the Human Microbiome for Whole Genome Sequencing

Anthony A. Fodor, Todd Z. DeSantis, [ ... ], Ashlee M. Earl

De Novo Transcriptome Assembly in Chili Pepper (Capsicum frutescens) to Identify Genes Involved in the Biosynthesis of Capsaicinoids

Shaoqun Liu, Wanshun Li, [ ... ], Jianjun Lei

MediaDB: A Database of Microbial Growth Conditions in Defined Media

Matthew A. Richards, Victor Cassen, [ ... ], Nathan D. Price

Chasing Migration Genes: A Brain Expressed Sequence Tag Resource for Summer and Migratory Monarch Butterflies (Danaus plexippus)

Haisun Zhu, Amy Casselman, Steven M. Reppert

Bioinformatic Analysis Reveals High Diversity of Bacterial Genes for Laccase-Like Enzymes

Luka Ausec, Martha Zakrzewski, [ ... ], Ines Mandic-Mulec

MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads

Thomas Nordahl Petersen, Oksana Lukjancenko, [ ... ], Thomas Sicheritz-Pontén

Network Properties of Complex Human Disease Genes Identified through Genome-Wide Association Studies

Fredrik Barrenas, Sreenivas Chavali, [ ... ], Mikael Benson

Comparative Analysis of Functional Metagenomic Annotation and the Mappability of Short Reads

Rogan Carr, Elhanan Borenstein

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