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Genomic databases

Fast and Sensitive Alignment of Microbial Whole Genome Sequencing Reads to Large Sequence Datasets on a Desktop PC: Application to Metagenomic Datasets and Pathogen Identification

Lőrinc S. Pongor, Roberto Vera, Balázs Ligeti

published 31 Jul 2014

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IthaGenes: An Interactive Database for Haemoglobin Variations and Epidemiology

Petros Kountouris, Carsten W. Lederer, Pavlos Fanis, Xenia Feleki, John Old, Marina Kleanthous

published 24 Jul 2014

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Novel Missense Variants of ZFPM2/FOG2 Identified in Conotruncal Heart Defect Patients Do Not Impair Interaction with GATA4

Wenwen Zhang, Li Shen, Zhantao Deng, Yibing Ding, Xuming Mo, Zhengfeng Xu, Qian Gao, Long Yi

published 15 Jul 2014

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Quickly Finding Orthologs as Reciprocal Best Hits with BLAT, LAST, and UBLAST: How Much Do We Miss?

Natalie Ward, Gabriel Moreno-Hagelsieb

published 11 Jul 2014

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Comparison of Deep-Water Viromes from the Atlantic Ocean and the Mediterranean Sea

Christian Winter, Juan A. L. Garcia, Markus G. Weinbauer, Michael S. DuBow, Gerhard J. Herndl

published 24 Jun 2014

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Analysis of the Transcriptome of Erigeron breviscapus Uncovers Putative Scutellarin and Chlorogenic Acids Biosynthetic Genes and Genetic Markers

Ni-Hao Jiang, Guang-Hui Zhang, Jia-Jin Zhang, Li-Ping Shu, Wei Zhang, Guang-Qiang Long, Tao Liu, Zheng-Gui Meng, Jun-Wen Chen, Sheng-Chao Yang

published 23 Jun 2014

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Genome-Wide Analysis of Repeat Diversity across the Family Musaceae

Petr Novák, Eva Hřibová, Pavel Neumann, Andrea Koblížková, Jaroslav Doležel, Jiří Macas

published 16 Jun 2014

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Analysis of Insecticide Resistance-Related Genes of the Carmine Spider Mite Tetranychus cinnabarinus Based on a De Novo Assembled Transcriptome

Zhifeng Xu, Wenyi Zhu, Yanchao Liu, Xing Liu, Qiushuang Chen, Miao Peng, Xiangzun Wang, Guangmao Shen, Lin He

published 15 May 2014

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The Prevalence of Species and Strains in the Human Microbiome: A Resource for Experimental Efforts

Laurens Kraal, Sahar Abubucker, Karthik Kota, Michael A. Fischbach, Makedonka Mitreva

published 14 May 2014

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Finding Sequences for over 270 Orphan Enzymes

Alexander G. Shearer, Tomer Altman, Christine D. Rhee

published 14 May 2014

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Physcomitrella patens Has Kinase-LRR R Gene Homologs and Interacting Proteins

Yusuke Tanigaki, Kenji Ito, Yoshiyuki Obuchi, Akiko Kosaka, Katsuyuki T. Yamato, Masahiro Okanami, Mikko T. Lehtonen, Jari P. T. Valkonen, Motomu Akita

published 18 Apr 2014

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Viral Communities Associated with Human Pericardial Fluids in Idiopathic Pericarditis

Laura Fancello, Sonia Monteil, Nikolay Popgeorgiev, Romain Rivet, Frédérique Gouriet, Pierre-Edouard Fournier, Didier Raoult, Christelle Desnues

published 01 Apr 2014

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An Effective Filter for IBD Detection in Large Data Sets

Lin Huang, Sivan Bercovici, Jesse M. Rodriguez, Serafim Batzoglou

published 25 Mar 2014

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