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Genomic databases

Transcriptome Assembly, Gene Annotation and Tissue Gene Expression Atlas of the Rainbow Trout

Mohamed Salem, Bam Paneru, Rafet Al-Tobasei, Fatima Abdouni, Gary H. Thorgaard, Caird E. Rexroad, Jianbo Yao

published 20 Mar 2015

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Transcriptome Sequence Analysis of an Ornamental Plant, Ananas comosus var. bracteatus, Revealed the Potential Unigenes Involved in Terpenoid and Phenylpropanoid Biosynthesis

Jun Ma, S. Kanakala, Yehua He, Junli Zhang, Xiaolan Zhong

published 13 Mar 2015

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Proteome Exploration to Provide a Resource for the Investigation of Ganoderma lucidum

Guo-Jun Yu, Ya-Lin Yin, Wen-Hui Yu, Wei Liu, Yan-Xia Jin, Alok Shrestha, Qing Yang, Xiang-Dong Ye, Hui Sun

published 10 Mar 2015

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Influence of Commonly Used Primer Systems on Automated Ribosomal Intergenic Spacer Analysis of Bacterial Communities in Environmental Samples

Witoon Purahong, Barbara Stempfhuber, Guillaume Lentendu, Davide Francioli, Thomas Reitz, François Buscot, Michael Schloter, Dirk Krüger

published 06 Mar 2015

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Scripps Genome ADVISER: Annotation and Distributed Variant Interpretation SERver

Phillip H. Pham, William J. Shipman, Galina A. Erikson, Nicholas J. Schork, Ali Torkamani

published 23 Feb 2015

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STBase: One Million Species Trees for Comparative Biology

Michelle M. McMahon, Akshay Deepak, David Fernández-Baca, Darren Boss, Michael J. Sanderson

published 13 Feb 2015

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Phylogenetic Profiling: How Much Input Data Is Enough?

Nives Škunca, Christophe Dessimoz

published 13 Feb 2015

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Metagenomic Profiling of Known and Unknown Microbes with MicrobeGPS

Martin S. Lindner, Bernhard Y. Renard

published 02 Feb 2015

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PRIMED: PRIMEr Database for Deleting and Tagging All Fission and Budding Yeast Genes Developed Using the Open-Source Genome Retrieval Script (GRS)

Michael T. Cummings, Richard I. Joh, Mo Motamedi

published 02 Feb 2015

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Strategies to Avoid Wrongly Labelled Genomes Using as Example the Detected Wrong Taxonomic Affiliation for Aeromonas Genomes in the GenBank Database

Roxana Beaz-Hidalgo, Mohammad J. Hossain, Mark R. Liles, Maria-Jose Figueras

published 21 Jan 2015

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Binpairs: Utilization of Illumina Paired-End Information for Improving Efficiency of Taxonomic Binning of Metagenomic Sequences

Anirban Dutta, Disha Tandon, Mohammed MH, Tungadri Bose, Sharmila S. Mande

published 31 Dec 2014

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Bacterial Bile Metabolising Gene Abundance in Crohn's, Ulcerative Colitis and Type 2 Diabetes Metagenomes

Alain Labbé, Jorge G. Ganopolsky, Christopher J. Martoni, Satya Prakash, Mitchell L. Jones

published 17 Dec 2014

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Genome-Wide Identification and Expression Profile Analysis of Citrus Sucrose Synthase Genes: Investigation of Possible Roles in the Regulation of Sugar Accumulation

Mohammad Zahidul Islam, Xiao-Mei Hu, Long-Fei Jin, Yong-Zhong Liu, Shu-Ang Peng

published 24 Nov 2014

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